Coexpression cluster: Cluster_315 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004109 coproporphyrinogen oxidase activity 3.77% (2/53) 9.26 3e-06 0.000621
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 3.77% (2/53) 7.45 5.5e-05 0.006484
GO:1901566 organonitrogen compound biosynthetic process 13.21% (7/53) 2.62 0.000133 0.007873
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 5.66% (3/53) 5.01 0.000113 0.008943
GO:0044271 cellular nitrogen compound biosynthetic process 13.21% (7/53) 2.43 0.000297 0.014069
GO:0019438 aromatic compound biosynthetic process 9.43% (5/53) 2.84 0.000659 0.014199
GO:0018130 heterocycle biosynthetic process 9.43% (5/53) 2.81 0.000731 0.014443
GO:0015252 proton channel activity 3.77% (2/53) 5.94 0.000488 0.014467
GO:0015035 protein-disulfide reductase activity 3.77% (2/53) 5.94 0.000488 0.014467
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 3.77% (2/53) 5.94 0.000488 0.014467
GO:0006779 porphyrin-containing compound biosynthetic process 3.77% (2/53) 5.73 0.000648 0.015363
GO:0015979 photosynthesis 5.66% (3/53) 4.2 0.000595 0.015678
GO:0018208 peptidyl-proline modification 3.77% (2/53) 5.21 0.001339 0.015864
GO:0000413 protein peptidyl-prolyl isomerization 3.77% (2/53) 5.21 0.001339 0.015864
GO:0015986 proton motive force-driven ATP synthesis 3.77% (2/53) 5.21 0.001339 0.015864
GO:0006754 ATP biosynthetic process 3.77% (2/53) 5.21 0.001339 0.015864
GO:1901362 organic cyclic compound biosynthetic process 9.43% (5/53) 2.7 0.001031 0.017462
GO:0015036 disulfide oxidoreductase activity 3.77% (2/53) 5.35 0.001106 0.017481
GO:0033014 tetrapyrrole biosynthetic process 3.77% (2/53) 5.3 0.001181 0.0175
GO:0006778 porphyrin-containing compound metabolic process 3.77% (2/53) 5.45 0.000963 0.017564
GO:0033013 tetrapyrrole metabolic process 3.77% (2/53) 5.09 0.001592 0.017971
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.77% (2/53) 5.01 0.001773 0.018271
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.77% (2/53) 5.01 0.001773 0.018271
GO:0005261 monoatomic cation channel activity 3.77% (2/53) 4.5 0.00355 0.021031
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.77% (2/53) 4.48 0.00368 0.021271
GO:0044249 cellular biosynthetic process 13.21% (7/53) 1.81 0.003529 0.021444
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.77% (2/53) 4.83 0.002266 0.021479
GO:0009142 nucleoside triphosphate biosynthetic process 3.77% (2/53) 4.83 0.002266 0.021479
GO:0019750 chloroplast localization 1.89% (1/53) 8.26 0.003265 0.021495
GO:0051644 plastid localization 1.89% (1/53) 8.26 0.003265 0.021495
GO:0043953 protein transport by the Tat complex 1.89% (1/53) 8.26 0.003265 0.021495
GO:0051667 establishment of plastid localization 1.89% (1/53) 8.26 0.003265 0.021495
GO:0046107 uracil biosynthetic process 1.89% (1/53) 8.26 0.003265 0.021495
GO:0008655 pyrimidine-containing compound salvage 1.89% (1/53) 8.26 0.003265 0.021495
GO:0009902 chloroplast relocation 1.89% (1/53) 8.26 0.003265 0.021495
GO:0006223 uracil salvage 1.89% (1/53) 8.26 0.003265 0.021495
GO:0043100 pyrimidine nucleobase salvage 1.89% (1/53) 8.26 0.003265 0.021495
GO:0004845 uracil phosphoribosyltransferase activity 1.89% (1/53) 8.26 0.003265 0.021495
GO:0008270 zinc ion binding 9.43% (5/53) 2.29 0.003499 0.021824
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 3.77% (2/53) 4.53 0.003422 0.021917
GO:0016859 cis-trans isomerase activity 3.77% (2/53) 4.42 0.003947 0.02227
GO:0009523 photosystem II 3.77% (2/53) 4.4 0.004083 0.022505
GO:0019860 uracil metabolic process 1.89% (1/53) 7.67 0.004894 0.026359
GO:0008152 metabolic process 35.85% (19/53) 0.91 0.002951 0.026896
GO:1901576 organic substance biosynthetic process 13.21% (7/53) 1.71 0.005201 0.027394
GO:0009152 purine ribonucleotide biosynthetic process 3.77% (2/53) 4.15 0.005729 0.029517
GO:0016491 oxidoreductase activity 13.21% (7/53) 1.63 0.007031 0.031442
GO:0009260 ribonucleotide biosynthetic process 3.77% (2/53) 4.01 0.006909 0.03149
GO:0046390 ribose phosphate biosynthetic process 3.77% (2/53) 4.01 0.006909 0.03149
GO:0010207 photosystem II assembly 1.89% (1/53) 7.26 0.00652 0.031534
GO:0051656 establishment of organelle localization 1.89% (1/53) 7.26 0.00652 0.031534
GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) 1.89% (1/53) 7.26 0.00652 0.031534
GO:0003674 molecular_function 66.04% (35/53) 0.44 0.007663 0.032433
GO:0055086 nucleobase-containing small molecule metabolic process 5.66% (3/53) 2.95 0.006894 0.032676
GO:0009058 biosynthetic process 13.21% (7/53) 1.61 0.007584 0.032682
GO:0034641 cellular nitrogen compound metabolic process 15.09% (8/53) 1.47 0.007506 0.032943
GO:0051640 organelle localization 1.89% (1/53) 6.94 0.008143 0.033274
GO:0046914 transition metal ion binding 11.32% (6/53) 1.77 0.008132 0.033811
GO:0046034 ATP metabolic process 3.77% (2/53) 3.8 0.009165 0.036202
GO:0006164 purine nucleotide biosynthetic process 3.77% (2/53) 3.8 0.009165 0.036202
GO:0009521 photosystem 3.77% (2/53) 3.78 0.009366 0.03639
GO:0015078 proton transmembrane transporter activity 3.77% (2/53) 3.72 0.01019 0.037153
GO:0009144 purine nucleoside triphosphate metabolic process 3.77% (2/53) 3.72 0.01019 0.037153
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.77% (2/53) 3.72 0.01019 0.037153
GO:0018193 peptidyl-amino acid modification 3.77% (2/53) 3.73 0.009981 0.038152
GO:0072522 purine-containing compound biosynthetic process 3.77% (2/53) 3.64 0.011262 0.039838
GO:0009199 ribonucleoside triphosphate metabolic process 3.77% (2/53) 3.64 0.011262 0.039838
GO:0009141 nucleoside triphosphate metabolic process 3.77% (2/53) 3.59 0.012155 0.042363
GO:0005216 monoatomic ion channel activity 3.77% (2/53) 3.46 0.014272 0.046336
GO:1901293 nucleoside phosphate biosynthetic process 3.77% (2/53) 3.46 0.014272 0.046336
GO:0009165 nucleotide biosynthetic process 3.77% (2/53) 3.46 0.014272 0.046336
GO:0098796 membrane protein complex 5.66% (3/53) 2.59 0.013518 0.04643
GO:0009773 photosynthetic electron transport in photosystem I 1.89% (1/53) 6.09 0.014611 0.046793
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 3.77% (2/53) 3.48 0.01403 0.0475
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (53) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms