Coexpression cluster: Cluster_191 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008017 microtubule binding 6.09% (12/197) 4.32 0.0 0.0
GO:0015631 tubulin binding 6.09% (12/197) 4.15 0.0 0.0
GO:0005488 binding 54.82% (108/197) 0.8 0.0 0.0
GO:0090304 nucleic acid metabolic process 14.21% (28/197) 2.15 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 15.74% (31/197) 1.97 0.0 0.0
GO:0006259 DNA metabolic process 7.61% (15/197) 3.08 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 17.77% (35/197) 1.71 0.0 0.0
GO:0046483 heterocycle metabolic process 15.74% (31/197) 1.83 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 15.74% (31/197) 1.8 0.0 0.0
GO:0003777 microtubule motor activity 4.06% (8/197) 4.61 0.0 0.0
GO:0007018 microtubule-based movement 4.06% (8/197) 4.61 0.0 0.0
GO:0008092 cytoskeletal protein binding 6.09% (12/197) 3.41 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 15.74% (31/197) 1.77 0.0 0.0
GO:0043170 macromolecule metabolic process 27.92% (55/197) 1.19 0.0 0.0
GO:0003774 cytoskeletal motor activity 4.06% (8/197) 4.32 0.0 0.0
GO:0006807 nitrogen compound metabolic process 29.44% (58/197) 1.1 0.0 0.0
GO:0097159 organic cyclic compound binding 34.52% (68/197) 0.96 0.0 1e-06
GO:0009987 cellular process 37.06% (73/197) 0.9 0.0 1e-06
GO:0003674 molecular_function 68.02% (134/197) 0.49 0.0 1e-06
GO:0008150 biological_process 51.78% (102/197) 0.66 0.0 1e-06
GO:0140657 ATP-dependent activity 8.12% (16/197) 2.48 0.0 1e-06
GO:0007017 microtubule-based process 4.57% (9/197) 3.66 0.0 2e-06
GO:0005524 ATP binding 17.77% (35/197) 1.45 0.0 2e-06
GO:0003676 nucleic acid binding 19.29% (38/197) 1.32 0.0 4e-06
GO:0005515 protein binding 25.38% (50/197) 1.07 0.0 7e-06
GO:0044238 primary metabolic process 30.96% (61/197) 0.92 0.0 7e-06
GO:0035639 purine ribonucleoside triphosphate binding 17.77% (35/197) 1.32 0.0 1.4e-05
GO:0022402 cell cycle process 3.55% (7/197) 3.74 1e-06 2.6e-05
GO:0032559 adenyl ribonucleotide binding 17.77% (35/197) 1.25 1e-06 3.6e-05
GO:0003723 RNA binding 8.63% (17/197) 1.94 3e-06 6.4e-05
GO:0006396 RNA processing 6.09% (12/197) 2.44 3e-06 6.6e-05
GO:0071704 organic substance metabolic process 30.96% (61/197) 0.81 4e-06 8.9e-05
GO:0032553 ribonucleotide binding 18.27% (36/197) 1.16 4e-06 9.3e-05
GO:0044237 cellular metabolic process 24.87% (49/197) 0.94 4e-06 9.5e-05
GO:0030554 adenyl nucleotide binding 17.77% (35/197) 1.18 4e-06 9.5e-05
GO:0097367 carbohydrate derivative binding 18.27% (36/197) 1.14 5e-06 0.000112
GO:0140097 catalytic activity, acting on DNA 4.06% (8/197) 3.05 6e-06 0.000127
GO:0032991 protein-containing complex 10.66% (21/197) 1.6 7e-06 0.000137
GO:0032555 purine ribonucleotide binding 17.77% (35/197) 1.14 8e-06 0.000158
GO:1903047 mitotic cell cycle process 2.03% (4/197) 4.9 9e-06 0.000167
GO:0008152 metabolic process 31.98% (63/197) 0.75 9e-06 0.000172
GO:0043168 anion binding 18.78% (37/197) 1.05 1.6e-05 0.000278
GO:0140640 catalytic activity, acting on a nucleic acid 6.6% (13/197) 2.07 1.6e-05 0.000284
GO:0140513 nuclear protein-containing complex 4.57% (9/197) 2.61 1.9e-05 0.000321
GO:0006281 DNA repair 4.06% (8/197) 2.79 2.4e-05 0.000387
GO:0017076 purine nucleotide binding 17.77% (35/197) 1.06 2.4e-05 0.000395
GO:1901265 nucleoside phosphate binding 18.27% (36/197) 1.03 3.1e-05 0.000465
GO:0000166 nucleotide binding 18.27% (36/197) 1.03 3.1e-05 0.000465
GO:0008094 ATP-dependent activity, acting on DNA 3.05% (6/197) 3.35 2.9e-05 0.000466
GO:1901363 heterocyclic compound binding 18.78% (37/197) 1.01 3e-05 0.00047
GO:0006974 DNA damage response 4.06% (8/197) 2.71 3.4e-05 0.000502
GO:0036094 small molecule binding 18.78% (37/197) 1.0 3.6e-05 0.000517
GO:0010564 regulation of cell cycle process 2.03% (4/197) 4.36 4.2e-05 0.000592
GO:0000398 mRNA splicing, via spliceosome 2.54% (5/197) 3.52 7.9e-05 0.001084
GO:0006260 DNA replication 2.54% (5/197) 3.52 7.9e-05 0.001084
GO:0033554 cellular response to stress 4.06% (8/197) 2.52 8.5e-05 0.001143
GO:0051716 cellular response to stimulus 4.06% (8/197) 2.46 0.000114 0.00151
GO:0005575 cellular_component 19.29% (38/197) 0.9 0.000116 0.001514
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.54% (5/197) 3.35 0.000138 0.001771
GO:0000375 RNA splicing, via transesterification reactions 2.54% (5/197) 3.28 0.000174 0.002186
GO:0034470 ncRNA processing 3.05% (6/197) 2.84 0.000205 0.002543
GO:0034660 ncRNA metabolic process 3.55% (7/197) 2.55 0.000213 0.002589
GO:0016070 RNA metabolic process 7.11% (14/197) 1.61 0.000233 0.002793
GO:0051128 regulation of cellular component organization 2.03% (4/197) 3.69 0.000264 0.003111
GO:0008380 RNA splicing 2.54% (5/197) 3.1 0.000307 0.003563
GO:0051726 regulation of cell cycle 2.03% (4/197) 3.56 0.000379 0.00433
GO:0043229 intracellular organelle 7.61% (15/197) 1.43 0.000506 0.00562
GO:0043226 organelle 7.61% (15/197) 1.43 0.000506 0.00562
GO:0032147 activation of protein kinase activity 1.02% (2/197) 5.78 0.000542 0.00576
GO:0005819 spindle 1.02% (2/197) 5.78 0.000542 0.00576
GO:0043167 ion binding 22.84% (45/197) 0.71 0.000529 0.00579
GO:0099513 polymeric cytoskeletal fiber 1.52% (3/197) 4.14 0.000646 0.006504
GO:0099512 supramolecular fiber 1.52% (3/197) 4.14 0.000646 0.006504
GO:0005874 microtubule 1.52% (3/197) 4.14 0.000646 0.006504
GO:0099081 supramolecular polymer 1.52% (3/197) 4.14 0.000646 0.006504
GO:0090224 regulation of spindle organization 1.02% (2/197) 5.56 0.000755 0.007406
GO:0060236 regulation of mitotic spindle organization 1.02% (2/197) 5.56 0.000755 0.007406
GO:0051276 chromosome organization 2.03% (4/197) 3.28 0.000793 0.007677
GO:0043228 non-membrane-bounded organelle 4.57% (9/197) 1.87 0.000881 0.008316
GO:0043232 intracellular non-membrane-bounded organelle 4.57% (9/197) 1.87 0.000881 0.008316
GO:0016043 cellular component organization 5.58% (11/197) 1.64 0.000897 0.008358
GO:0033043 regulation of organelle organization 1.52% (3/197) 3.95 0.000961 0.008637
GO:0099080 supramolecular complex 1.52% (3/197) 3.95 0.000961 0.008637
GO:1990904 ribonucleoprotein complex 3.05% (6/197) 2.42 0.000944 0.008688
GO:0045860 positive regulation of protein kinase activity 1.02% (2/197) 5.36 0.001003 0.008806
GO:0001934 positive regulation of protein phosphorylation 1.02% (2/197) 5.36 0.001003 0.008806
GO:0010562 positive regulation of phosphorus metabolic process 1.02% (2/197) 5.19 0.001284 0.010541
GO:0045937 positive regulation of phosphate metabolic process 1.02% (2/197) 5.19 0.001284 0.010541
GO:0033674 positive regulation of kinase activity 1.02% (2/197) 5.19 0.001284 0.010541
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 1.02% (2/197) 5.19 0.001284 0.010541
GO:0070507 regulation of microtubule cytoskeleton organization 1.02% (2/197) 5.19 0.001284 0.010541
GO:0042327 positive regulation of phosphorylation 1.02% (2/197) 5.19 0.001284 0.010541
GO:0006397 mRNA processing 2.54% (5/197) 2.63 0.001346 0.010931
GO:1990234 transferase complex 2.54% (5/197) 2.59 0.001535 0.012328
GO:0032886 regulation of microtubule-based process 1.02% (2/197) 4.9 0.001947 0.015471
GO:0071840 cellular component organization or biogenesis 5.58% (11/197) 1.47 0.002283 0.017954
GO:1901990 regulation of mitotic cell cycle phase transition 1.02% (2/197) 4.78 0.002327 0.01811
GO:0007346 regulation of mitotic cell cycle 1.02% (2/197) 4.66 0.002739 0.020887
GO:0006265 DNA topological change 1.02% (2/197) 4.66 0.002739 0.020887
GO:0006996 organelle organization 3.05% (6/197) 2.07 0.003305 0.024951
GO:0016071 mRNA metabolic process 2.54% (5/197) 2.33 0.00335 0.025044
GO:0003916 DNA topoisomerase activity 1.02% (2/197) 4.46 0.003657 0.027073
GO:1902494 catalytic complex 3.55% (7/197) 1.82 0.003996 0.029293
GO:0005694 chromosome 1.02% (2/197) 4.36 0.004163 0.029654
GO:0031401 positive regulation of protein modification process 1.02% (2/197) 4.36 0.004163 0.029654
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 1.02% (2/197) 4.36 0.004163 0.029654
GO:0016307 obsolete phosphatidylinositol phosphate kinase activity 1.02% (2/197) 4.28 0.0047 0.032854
GO:0051347 positive regulation of transferase activity 1.02% (2/197) 4.28 0.0047 0.032854
GO:0019538 protein metabolic process 14.21% (28/197) 0.72 0.006106 0.034923
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 0.51% (1/197) 7.36 0.006073 0.035
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 0.51% (1/197) 7.36 0.006073 0.035
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 0.51% (1/197) 7.36 0.006073 0.035
GO:0062105 RNA 2'-O-methyltransferase activity 0.51% (1/197) 7.36 0.006073 0.035
GO:0106050 tRNA 2'-O-methyltransferase activity 0.51% (1/197) 7.36 0.006073 0.035
GO:0097255 R2TP complex 0.51% (1/197) 7.36 0.006073 0.035
GO:0140719 constitutive heterochromatin formation 0.51% (1/197) 7.36 0.006073 0.035
GO:0030620 U2 snRNA binding 0.51% (1/197) 7.36 0.006073 0.035
GO:1902410 mitotic cytokinetic process 0.51% (1/197) 7.36 0.006073 0.035
GO:0000914 phragmoplast assembly 0.51% (1/197) 7.36 0.006073 0.035
GO:0031509 subtelomeric heterochromatin formation 0.51% (1/197) 7.36 0.006073 0.035
GO:0008608 attachment of spindle microtubules to kinetochore 0.51% (1/197) 7.36 0.006073 0.035
GO:0032506 cytokinetic process 0.51% (1/197) 7.36 0.006073 0.035
GO:0033314 mitotic DNA replication checkpoint signaling 0.51% (1/197) 7.36 0.006073 0.035
GO:0043625 delta DNA polymerase complex 0.51% (1/197) 7.36 0.006073 0.035
GO:0010212 response to ionizing radiation 0.51% (1/197) 7.36 0.006073 0.035
GO:0045488 pectin metabolic process 0.51% (1/197) 7.36 0.006073 0.035
GO:0010393 galacturonan metabolic process 0.51% (1/197) 7.36 0.006073 0.035
GO:0050794 regulation of cellular process 10.66% (21/197) 0.88 0.005083 0.035205
GO:0051493 regulation of cytoskeleton organization 1.02% (2/197) 4.19 0.005266 0.035819
GO:0030684 preribosome 1.02% (2/197) 4.19 0.005266 0.035819
GO:1901564 organonitrogen compound metabolic process 16.75% (33/197) 0.66 0.005363 0.036151
GO:0005643 nuclear pore 1.02% (2/197) 4.04 0.006488 0.036554
GO:0006399 tRNA metabolic process 2.03% (4/197) 2.44 0.006452 0.036624
GO:1901987 regulation of cell cycle phase transition 1.02% (2/197) 4.12 0.005862 0.039168
GO:0051247 positive regulation of protein metabolic process 1.02% (2/197) 3.97 0.007142 0.039943
GO:0008033 tRNA processing 1.52% (3/197) 2.9 0.007623 0.042321
GO:0071103 DNA conformation change 1.02% (2/197) 3.9 0.007825 0.043124
GO:0006284 base-excision repair 1.02% (2/197) 3.84 0.008536 0.046703
GO:0006364 rRNA processing 1.52% (3/197) 2.82 0.00896 0.048667
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (197) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms