Coexpression cluster: Cluster_267 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 10.2% (5/49) 4.07 1.2e-05 0.001548
GO:0006399 tRNA metabolic process 8.16% (4/49) 4.45 3.4e-05 0.002202
GO:0004386 helicase activity 8.16% (4/49) 4.53 2.8e-05 0.002405
GO:0140640 catalytic activity, acting on a nucleic acid 14.29% (7/49) 3.19 1.1e-05 0.002806
GO:0140098 catalytic activity, acting on RNA 10.2% (5/49) 3.4 0.000111 0.005691
GO:0016070 RNA metabolic process 14.29% (7/49) 2.62 0.000133 0.005704
GO:1901363 heterocyclic compound binding 26.53% (13/49) 1.51 0.000415 0.006272
GO:0032553 ribonucleotide binding 24.49% (12/49) 1.58 0.000464 0.006275
GO:0006325 chromatin organization 6.12% (3/49) 4.81 0.000172 0.006322
GO:0032559 adenyl ribonucleotide binding 24.49% (12/49) 1.71 0.000198 0.006348
GO:0036094 small molecule binding 26.53% (13/49) 1.5 0.000449 0.006414
GO:0030014 CCR4-NOT complex 4.08% (2/49) 6.12 0.000376 0.006442
GO:0140101 catalytic activity, acting on a tRNA 6.12% (3/49) 4.45 0.000358 0.006578
GO:0097367 carbohydrate derivative binding 24.49% (12/49) 1.56 0.000514 0.006599
GO:0032555 purine ribonucleotide binding 24.49% (12/49) 1.6 0.000414 0.006651
GO:0035639 purine ribonucleoside triphosphate binding 22.45% (11/49) 1.65 0.000549 0.006719
GO:0071824 protein-DNA complex organization 6.12% (3/49) 4.46 0.000347 0.006858
GO:0005524 ATP binding 22.45% (11/49) 1.79 0.000251 0.007179
GO:0043933 protein-containing complex organization 8.16% (4/49) 3.59 0.000343 0.007354
GO:0030554 adenyl nucleotide binding 24.49% (12/49) 1.64 0.00032 0.007471
GO:0017076 purine nucleotide binding 24.49% (12/49) 1.53 0.000649 0.007586
GO:0140657 ATP-dependent activity 10.2% (5/49) 2.81 0.000712 0.007955
GO:0043168 anion binding 26.53% (13/49) 1.55 0.000312 0.008024
GO:0090304 nucleic acid metabolic process 14.29% (7/49) 2.15 0.00091 0.009745
GO:1901265 nucleoside phosphate binding 24.49% (12/49) 1.45 0.001051 0.01039
GO:0000166 nucleotide binding 24.49% (12/49) 1.45 0.001051 0.01039
GO:0034470 ncRNA processing 6.12% (3/49) 3.85 0.001203 0.011448
GO:0101030 tRNA-guanine transglycosylation 2.04% (1/49) 9.37 0.001511 0.013865
GO:0006400 tRNA modification 4.08% (2/49) 4.98 0.001852 0.014871
GO:0009987 cellular process 38.78% (19/49) 0.96 0.001806 0.014974
GO:0016874 ligase activity 6.12% (3/49) 3.67 0.001709 0.015145
GO:0016043 cellular component organization 10.2% (5/49) 2.51 0.00179 0.015337
GO:0006418 tRNA aminoacylation for protein translation 4.08% (2/49) 4.59 0.003154 0.016542
GO:0043039 tRNA aminoacylation 4.08% (2/49) 4.59 0.003154 0.016542
GO:0043038 amino acid activation 4.08% (2/49) 4.59 0.003154 0.016542
GO:0004812 aminoacyl-tRNA ligase activity 4.08% (2/49) 4.59 0.003154 0.016542
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.08% (2/49) 4.59 0.003154 0.016542
GO:0006139 nucleobase-containing compound metabolic process 14.29% (7/49) 1.83 0.003275 0.016832
GO:0006396 RNA processing 8.16% (4/49) 2.86 0.002219 0.017283
GO:0003989 acetyl-CoA carboxylase activity 2.04% (1/49) 8.37 0.003019 0.017633
GO:0008479 tRNA-guanosine(34) queuine transglycosylase activity 2.04% (1/49) 8.37 0.003019 0.017633
GO:0016885 ligase activity, forming carbon-carbon bonds 2.04% (1/49) 8.37 0.003019 0.017633
GO:0006433 prolyl-tRNA aminoacylation 2.04% (1/49) 8.37 0.003019 0.017633
GO:0000829 inositol heptakisphosphate kinase activity 2.04% (1/49) 8.37 0.003019 0.017633
GO:0034457 Mpp10 complex 2.04% (1/49) 8.37 0.003019 0.017633
GO:0004827 proline-tRNA ligase activity 2.04% (1/49) 8.37 0.003019 0.017633
GO:0016421 CoA carboxylase activity 2.04% (1/49) 8.37 0.003019 0.017633
GO:0008186 ATP-dependent activity, acting on RNA 4.08% (2/49) 4.67 0.002824 0.020739
GO:0003724 RNA helicase activity 4.08% (2/49) 4.67 0.002824 0.020739
GO:0004828 serine-tRNA ligase activity 2.04% (1/49) 7.79 0.004525 0.021143
GO:0030041 actin filament polymerization 2.04% (1/49) 7.79 0.004525 0.021143
GO:0006434 seryl-tRNA aminoacylation 2.04% (1/49) 7.79 0.004525 0.021143
GO:0071840 cellular component organization or biogenesis 10.2% (5/49) 2.34 0.002989 0.021339
GO:0006338 chromatin remodeling 4.08% (2/49) 4.35 0.004375 0.022049
GO:0008033 tRNA processing 4.08% (2/49) 4.33 0.004508 0.022279
GO:0046483 heterocycle metabolic process 14.29% (7/49) 1.69 0.005539 0.025422
GO:0072546 EMC complex 2.04% (1/49) 7.37 0.006029 0.026261
GO:0051258 protein polymerization 2.04% (1/49) 7.37 0.006029 0.026261
GO:0006725 cellular aromatic compound metabolic process 14.29% (7/49) 1.66 0.006211 0.026603
GO:0043167 ion binding 28.57% (14/49) 1.03 0.005936 0.026766
GO:1901360 organic cyclic compound metabolic process 14.29% (7/49) 1.63 0.006893 0.029039
GO:0032991 protein-containing complex 12.24% (6/49) 1.8 0.007192 0.02981
GO:0005488 binding 48.98% (24/49) 0.64 0.007812 0.03187
GO:0008318 protein prenyltransferase activity 2.04% (1/49) 6.79 0.00903 0.035161
GO:0034314 Arp2/3 complex-mediated actin nucleation 2.04% (1/49) 6.79 0.00903 0.035161
GO:0005885 Arp2/3 protein complex 2.04% (1/49) 6.79 0.00903 0.035161
GO:0018342 protein prenylation 2.04% (1/49) 6.56 0.010527 0.039785
GO:0097354 prenylation 2.04% (1/49) 6.56 0.010527 0.039785
GO:0110053 regulation of actin filament organization 2.04% (1/49) 6.2 0.013515 0.0457
GO:0030833 regulation of actin filament polymerization 2.04% (1/49) 6.2 0.013515 0.0457
GO:0030544 Hsp70 protein binding 2.04% (1/49) 6.2 0.013515 0.0457
GO:0008064 regulation of actin polymerization or depolymerization 2.04% (1/49) 6.2 0.013515 0.0457
GO:0002098 tRNA wobble uridine modification 2.04% (1/49) 6.2 0.013515 0.0457
GO:0032956 regulation of actin cytoskeleton organization 2.04% (1/49) 6.2 0.013515 0.0457
GO:0032970 regulation of actin filament-based process 2.04% (1/49) 6.2 0.013515 0.0457
GO:0030832 regulation of actin filament length 2.04% (1/49) 6.2 0.013515 0.0457
GO:0043254 regulation of protein-containing complex assembly 2.04% (1/49) 6.05 0.015005 0.048204
GO:0032271 regulation of protein polymerization 2.04% (1/49) 6.05 0.015005 0.048204
GO:0002097 tRNA wobble base modification 2.04% (1/49) 6.05 0.015005 0.048204
GO:1902903 regulation of supramolecular fiber organization 2.04% (1/49) 6.05 0.015005 0.048204
GO:0032535 regulation of cellular component size 2.04% (1/49) 5.91 0.016493 0.049868
GO:0090066 regulation of anatomical structure size 2.04% (1/49) 5.91 0.016493 0.049868
GO:0031011 Ino80 complex 2.04% (1/49) 5.91 0.016493 0.049868
GO:0097346 INO80-type complex 2.04% (1/49) 5.91 0.016493 0.049868
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (49) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms