Coexpression cluster: Cluster_11 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003700 DNA-binding transcription factor activity 11.11% (22/198) 2.19 0.0 1e-06
GO:0140110 transcription regulator activity 11.11% (22/198) 2.1 0.0 2e-06
GO:0016791 phosphatase activity 5.05% (10/198) 2.82 2e-06 0.000223
GO:0051252 regulation of RNA metabolic process 11.11% (22/198) 1.54 8e-06 0.000339
GO:0065007 biological regulation 15.15% (30/198) 1.26 8e-06 0.00036
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.11% (22/198) 1.52 1e-05 0.000363
GO:0050794 regulation of cellular process 14.14% (28/198) 1.29 1.1e-05 0.000367
GO:0006355 regulation of DNA-templated transcription 11.11% (22/198) 1.54 8e-06 0.000399
GO:2001141 regulation of RNA biosynthetic process 11.11% (22/198) 1.54 8e-06 0.000399
GO:0050789 regulation of biological process 15.15% (30/198) 1.3 4e-06 0.000403
GO:0042578 phosphoric ester hydrolase activity 5.05% (10/198) 2.6 7e-06 0.000531
GO:0043565 sequence-specific DNA binding 5.05% (10/198) 2.43 2e-05 0.000615
GO:0009889 regulation of biosynthetic process 11.11% (22/198) 1.41 3.1e-05 0.000647
GO:0031326 regulation of cellular biosynthetic process 11.11% (22/198) 1.41 3.1e-05 0.000647
GO:0003677 DNA binding 11.11% (22/198) 1.4 3.6e-05 0.000692
GO:0080090 regulation of primary metabolic process 11.11% (22/198) 1.43 2.6e-05 0.000697
GO:0010556 regulation of macromolecule biosynthetic process 11.11% (22/198) 1.41 3.1e-05 0.000712
GO:0051171 regulation of nitrogen compound metabolic process 11.11% (22/198) 1.43 2.5e-05 0.000717
GO:0010468 regulation of gene expression 11.11% (22/198) 1.41 3e-05 0.000743
GO:0009074 aromatic amino acid family catabolic process 1.52% (3/198) 5.24 6.1e-05 0.001079
GO:0060255 regulation of macromolecule metabolic process 11.11% (22/198) 1.34 6.6e-05 0.001102
GO:0031323 regulation of cellular metabolic process 11.11% (22/198) 1.35 6e-05 0.001105
GO:0019222 regulation of metabolic process 11.11% (22/198) 1.32 7.5e-05 0.001203
GO:1901606 alpha-amino acid catabolic process 1.52% (3/198) 4.62 0.000237 0.003646
GO:0009063 amino acid catabolic process 1.52% (3/198) 4.48 0.000317 0.004686
GO:0140096 catalytic activity, acting on a protein 13.64% (27/198) 0.96 0.000696 0.009911
GO:0016054 organic acid catabolic process 1.52% (3/198) 4.03 0.000805 0.010641
GO:0046395 carboxylic acid catabolic process 1.52% (3/198) 4.03 0.000805 0.010641
GO:0006559 L-phenylalanine catabolic process 1.01% (2/198) 5.19 0.001297 0.016001
GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process 1.01% (2/198) 5.19 0.001297 0.016001
GO:0016841 ammonia-lyase activity 1.01% (2/198) 5.03 0.001615 0.018676
GO:0004722 protein serine/threonine phosphatase activity 1.52% (3/198) 3.69 0.001614 0.019268
GO:0044282 small molecule catabolic process 1.52% (3/198) 3.66 0.001741 0.019521
GO:0016311 dephosphorylation 2.02% (4/198) 2.95 0.001854 0.020176
GO:0004805 trehalose-phosphatase activity 1.01% (2/198) 4.9 0.001966 0.020785
GO:0016788 hydrolase activity, acting on ester bonds 5.56% (11/198) 1.48 0.002134 0.021933
GO:0006558 L-phenylalanine metabolic process 1.01% (2/198) 4.45 0.003694 0.035966
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 1.01% (2/198) 4.45 0.003694 0.035966
GO:0036211 protein modification process 10.61% (21/198) 0.89 0.004922 0.044418
GO:0009072 aromatic amino acid metabolic process 1.52% (3/198) 3.13 0.004895 0.04528
GO:0006470 protein dephosphorylation 1.52% (3/198) 3.13 0.004895 0.04528
GO:0007166 cell surface receptor signaling pathway 2.02% (4/198) 2.54 0.005167 0.045518
GO:0009733 response to auxin 1.52% (3/198) 3.06 0.005665 0.048743
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (198) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms