Coexpression cluster: Cluster_34 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 7.29% (14/192) 4.73 0.0 0.0
GO:0009523 photosystem II 5.73% (11/192) 5.0 0.0 0.0
GO:0015979 photosynthesis 6.77% (13/192) 4.46 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.65% (7/192) 5.68 0.0 0.0
GO:0019898 extrinsic component of membrane 3.12% (6/192) 5.82 0.0 0.0
GO:1990204 oxidoreductase complex 4.17% (8/192) 4.59 0.0 0.0
GO:0098796 membrane protein complex 7.29% (14/192) 2.96 0.0 0.0
GO:1902494 catalytic complex 6.25% (12/192) 2.63 1e-06 4.4e-05
GO:0051540 metal cluster binding 3.65% (7/192) 3.7 1e-06 6.5e-05
GO:0051536 iron-sulfur cluster binding 3.65% (7/192) 3.7 1e-06 6.5e-05
GO:0051537 2 iron, 2 sulfur cluster binding 2.6% (5/192) 4.68 1e-06 6.9e-05
GO:0032991 protein-containing complex 10.94% (21/192) 1.64 5e-06 0.000204
GO:0008137 NADH dehydrogenase (ubiquinone) activity 2.08% (4/192) 4.88 1e-05 0.000367
GO:0050136 NADH dehydrogenase (quinone) activity 2.08% (4/192) 4.88 1e-05 0.000367
GO:0006091 generation of precursor metabolites and energy 4.17% (8/192) 2.93 1.1e-05 0.000401
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 2.08% (4/192) 4.65 1.9e-05 0.000625
GO:0003954 NADH dehydrogenase activity 2.08% (4/192) 4.59 2.2e-05 0.000683
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 2.08% (4/192) 4.54 2.5e-05 0.000745
GO:0070887 cellular response to chemical stimulus 1.56% (3/192) 5.53 3.3e-05 0.000912
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 2.08% (4/192) 4.36 4.3e-05 0.001134
GO:0016491 oxidoreductase activity 10.94% (21/192) 1.36 7.8e-05 0.001992
GO:0010206 photosystem II repair 1.04% (2/192) 6.82 0.000104 0.002523
GO:0022900 electron transport chain 2.6% (5/192) 3.35 0.000138 0.003191
GO:0003824 catalytic activity 35.42% (68/192) 0.57 0.000208 0.004427
GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity 1.04% (2/192) 6.4 0.000207 0.004608
GO:0009507 chloroplast 1.56% (3/192) 4.53 0.000289 0.005931
GO:0009536 plastid 1.56% (3/192) 4.46 0.000331 0.006089
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.08% (4/192) 3.62 0.00032 0.006099
GO:0009538 photosystem I reaction center 1.04% (2/192) 6.08 0.000344 0.00612
GO:0009055 electron transfer activity 3.12% (6/192) 2.73 0.000312 0.006162
GO:0016859 cis-trans isomerase activity 2.08% (4/192) 3.57 0.000368 0.006322
GO:0008152 metabolic process 29.17% (56/192) 0.62 0.000429 0.006721
GO:0008168 methyltransferase activity 3.65% (7/192) 2.38 0.000429 0.006922
GO:0009522 photosystem I 1.56% (3/192) 4.34 0.000427 0.007104
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.08% (4/192) 3.47 0.000477 0.007262
GO:0030091 protein repair 1.04% (2/192) 5.82 0.000515 0.007414
GO:0050308 sugar-phosphatase activity 1.04% (2/192) 5.82 0.000515 0.007414
GO:0016741 transferase activity, transferring one-carbon groups 3.65% (7/192) 2.29 0.000611 0.008576
GO:0004176 ATP-dependent peptidase activity 1.56% (3/192) 4.08 0.000737 0.010068
GO:0016853 isomerase activity 3.12% (6/192) 2.45 0.000874 0.011642
GO:0034599 cellular response to oxidative stress 1.04% (2/192) 5.23 0.001221 0.015492
GO:0062197 cellular response to chemical stress 1.04% (2/192) 5.23 0.001221 0.015492
GO:0008237 metallopeptidase activity 2.08% (4/192) 2.96 0.001805 0.022376
GO:0055035 plastid thylakoid membrane 1.04% (2/192) 4.82 0.002212 0.026201
GO:0009535 chloroplast thylakoid membrane 1.04% (2/192) 4.82 0.002212 0.026201
GO:0005575 cellular_component 17.19% (33/192) 0.73 0.002439 0.02826
GO:0048038 quinone binding 1.04% (2/192) 4.4 0.00396 0.044906
GO:0004222 metalloendopeptidase activity 1.56% (3/192) 3.23 0.004056 0.045039
GO:0009579 thylakoid 1.04% (2/192) 4.31 0.00447 0.047655
GO:0042170 plastid membrane 1.04% (2/192) 4.31 0.00447 0.047655
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (192) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms