Coexpression cluster: Cluster_13 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016071 mRNA metabolic process 6.67% (5/75) 3.72 4e-05 0.009792
GO:0003723 RNA binding 10.67% (8/75) 2.24 0.000283 0.011467
GO:0019222 regulation of metabolic process 14.67% (11/75) 1.73 0.000454 0.012256
GO:0060255 regulation of macromolecule metabolic process 14.67% (11/75) 1.74 0.000421 0.012776
GO:0031326 regulation of cellular biosynthetic process 14.67% (11/75) 1.81 0.000276 0.013426
GO:0009889 regulation of biosynthetic process 14.67% (11/75) 1.81 0.000276 0.013426
GO:0031323 regulation of cellular metabolic process 14.67% (11/75) 1.75 0.000399 0.013844
GO:0140535 intracellular protein-containing complex 5.33% (4/75) 3.36 0.000634 0.013997
GO:0008270 zinc ion binding 9.33% (7/75) 2.28 0.000609 0.014807
GO:0030014 CCR4-NOT complex 2.67% (2/75) 5.51 0.000879 0.017804
GO:0050794 regulation of cellular process 16.0% (12/75) 1.47 0.001169 0.021859
GO:0010556 regulation of macromolecule biosynthetic process 14.67% (11/75) 1.81 0.000273 0.022097
GO:0065007 biological regulation 16.0% (12/75) 1.34 0.002511 0.030504
GO:0090304 nucleic acid metabolic process 10.67% (8/75) 1.73 0.002765 0.030541
GO:0006402 mRNA catabolic process 2.67% (2/75) 4.71 0.002659 0.030763
GO:0019219 regulation of nucleobase-containing compound metabolic process 12.0% (9/75) 1.63 0.00242 0.030948
GO:0034508 centromere complex assembly 1.33% (1/75) 8.76 0.002312 0.031212
GO:0051252 regulation of RNA metabolic process 12.0% (9/75) 1.65 0.002244 0.03208
GO:0010468 regulation of gene expression 14.67% (11/75) 1.81 0.000269 0.03273
GO:0006355 regulation of DNA-templated transcription 12.0% (9/75) 1.66 0.00216 0.032811
GO:2001141 regulation of RNA biosynthetic process 12.0% (9/75) 1.66 0.00216 0.032811
GO:0050789 regulation of biological process 16.0% (12/75) 1.38 0.001962 0.034058
GO:0080090 regulation of primary metabolic process 12.0% (9/75) 1.54 0.003717 0.036126
GO:0006397 mRNA processing 4.0% (3/75) 3.29 0.003668 0.037142
GO:0042276 error-prone translesion synthesis 1.33% (1/75) 7.76 0.004619 0.037412
GO:0046608 carotenoid isomerase activity 1.33% (1/75) 7.76 0.004619 0.037412
GO:0070939 Dsl1/NZR complex 1.33% (1/75) 7.76 0.004619 0.037412
GO:0051171 regulation of nitrogen compound metabolic process 12.0% (9/75) 1.54 0.003645 0.038505
GO:0016114 terpenoid biosynthetic process 2.67% (2/75) 4.23 0.005111 0.040065
GO:0003676 nucleic acid binding 17.33% (13/75) 1.17 0.004581 0.041233
GO:0006401 RNA catabolic process 2.67% (2/75) 4.33 0.004479 0.041864
GO:0006721 terpenoid metabolic process 2.67% (2/75) 4.14 0.005782 0.043904
GO:0006301 postreplication repair 1.33% (1/75) 7.17 0.00692 0.046712
GO:0008897 holo-[acyl-carrier-protein] synthase activity 1.33% (1/75) 7.17 0.00692 0.046712
GO:0019985 translesion synthesis 1.33% (1/75) 7.17 0.00692 0.046712
GO:0046872 metal ion binding 13.33% (10/75) 1.32 0.006391 0.047064
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms