Coexpression cluster: Cluster_387 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009135 purine nucleoside diphosphate metabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0046031 ADP metabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0019364 pyridine nucleotide catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009134 nucleoside diphosphate catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009137 purine nucleoside diphosphate catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009154 purine ribonucleotide catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009179 purine ribonucleoside diphosphate metabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009181 purine ribonucleoside diphosphate catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009185 ribonucleoside diphosphate metabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009191 ribonucleoside diphosphate catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009261 ribonucleotide catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0046032 ADP catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0006096 glycolytic process 9.43% (5/53) 6.1 0.0 0.0
GO:0006195 purine nucleotide catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0072526 pyridine-containing compound catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0072523 purine-containing compound catabolic process 9.43% (5/53) 6.1 0.0 0.0
GO:0009132 nucleoside diphosphate metabolic process 9.43% (5/53) 6.08 0.0 0.0
GO:0009166 nucleotide catabolic process 9.43% (5/53) 6.05 0.0 0.0
GO:1901292 nucleoside phosphate catabolic process 9.43% (5/53) 5.98 0.0 0.0
GO:0046434 organophosphate catabolic process 9.43% (5/53) 5.87 0.0 0.0
GO:0006090 pyruvate metabolic process 9.43% (5/53) 5.71 0.0 1e-06
GO:0046496 nicotinamide nucleotide metabolic process 9.43% (5/53) 5.6 0.0 1e-06
GO:0019362 pyridine nucleotide metabolic process 9.43% (5/53) 5.58 0.0 1e-06
GO:1901136 carbohydrate derivative catabolic process 9.43% (5/53) 5.53 0.0 1e-06
GO:0016052 carbohydrate catabolic process 9.43% (5/53) 5.52 0.0 1e-06
GO:0072524 pyridine-containing compound metabolic process 9.43% (5/53) 5.39 0.0 2e-06
GO:0030955 potassium ion binding 5.66% (3/53) 7.9 0.0 3e-06
GO:0004743 pyruvate kinase activity 5.66% (3/53) 7.9 0.0 3e-06
GO:0031420 alkali metal ion binding 5.66% (3/53) 7.9 0.0 3e-06
GO:0034655 nucleobase-containing compound catabolic process 9.43% (5/53) 5.22 0.0 3e-06
GO:0046034 ATP metabolic process 9.43% (5/53) 5.18 0.0 4e-06
GO:0009205 purine ribonucleoside triphosphate metabolic process 9.43% (5/53) 5.11 0.0 4e-06
GO:0044270 cellular nitrogen compound catabolic process 9.43% (5/53) 5.11 0.0 4e-06
GO:0009144 purine nucleoside triphosphate metabolic process 9.43% (5/53) 5.11 0.0 4e-06
GO:0046700 heterocycle catabolic process 9.43% (5/53) 5.11 0.0 4e-06
GO:0009199 ribonucleoside triphosphate metabolic process 9.43% (5/53) 5.04 0.0 5e-06
GO:0009141 nucleoside triphosphate metabolic process 9.43% (5/53) 4.99 1e-06 6e-06
GO:0019439 aromatic compound catabolic process 9.43% (5/53) 4.77 1e-06 1.2e-05
GO:1901361 organic cyclic compound catabolic process 9.43% (5/53) 4.76 1e-06 1.2e-05
GO:1901565 organonitrogen compound catabolic process 9.43% (5/53) 4.68 2e-06 1.5e-05
GO:0009150 purine ribonucleotide metabolic process 9.43% (5/53) 4.64 2e-06 1.7e-05
GO:0009259 ribonucleotide metabolic process 9.43% (5/53) 4.57 2e-06 2.2e-05
GO:0019693 ribose phosphate metabolic process 9.43% (5/53) 4.54 3e-06 2.3e-05
GO:0006091 generation of precursor metabolites and energy 9.43% (5/53) 4.45 3e-06 3e-05
GO:0019752 carboxylic acid metabolic process 13.21% (7/53) 3.43 4e-06 3.2e-05
GO:0006082 organic acid metabolic process 13.21% (7/53) 3.42 4e-06 3.3e-05
GO:0043436 oxoacid metabolic process 13.21% (7/53) 3.42 4e-06 3.3e-05
GO:0032787 monocarboxylic acid metabolic process 9.43% (5/53) 4.42 4e-06 3.3e-05
GO:0006163 purine nucleotide metabolic process 9.43% (5/53) 4.38 4e-06 3.5e-05
GO:0072521 purine-containing compound metabolic process 9.43% (5/53) 4.29 6e-06 4.7e-05
GO:0009117 nucleotide metabolic process 9.43% (5/53) 4.18 9e-06 6.6e-05
GO:0006753 nucleoside phosphate metabolic process 9.43% (5/53) 4.16 9e-06 6.9e-05
GO:0044281 small molecule metabolic process 15.09% (8/53) 2.93 9e-06 7e-05
GO:0055086 nucleobase-containing small molecule metabolic process 9.43% (5/53) 3.9 2.2e-05 0.000159
GO:1901135 carbohydrate derivative metabolic process 9.43% (5/53) 3.8 3e-05 0.000216
GO:0044248 cellular catabolic process 9.43% (5/53) 3.55 6.9e-05 0.000482
GO:0019637 organophosphate metabolic process 9.43% (5/53) 3.3 0.000153 0.001048
GO:0003674 molecular_function 67.92% (36/53) 0.67 0.000187 0.001263
GO:0005975 carbohydrate metabolic process 11.32% (6/53) 2.78 0.000233 0.001541
GO:0043169 cation binding 18.87% (10/53) 1.92 0.000253 0.001649
GO:0008150 biological_process 50.94% (27/53) 0.82 0.000587 0.003701
GO:0000287 magnesium ion binding 5.66% (3/53) 4.2 0.000598 0.003714
GO:1901564 organonitrogen compound metabolic process 26.42% (14/53) 1.39 0.000609 0.00372
GO:0016740 transferase activity 24.53% (13/53) 1.47 0.000586 0.003755
GO:1901575 organic substance catabolic process 9.43% (5/53) 2.83 0.000676 0.004067
GO:0009056 catabolic process 9.43% (5/53) 2.78 0.000798 0.004726
GO:0046872 metal ion binding 16.98% (9/53) 1.82 0.0009 0.00525
GO:0003824 catalytic activity 41.51% (22/53) 0.92 0.001124 0.006463
GO:0005795 Golgi stack 1.89% (1/53) 9.64 0.001256 0.007017
GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity 1.89% (1/53) 9.64 0.001256 0.007017
GO:0006807 nitrogen compound metabolic process 28.3% (15/53) 1.16 0.001811 0.009972
GO:0009987 cellular process 33.96% (18/53) 1.01 0.001857 0.010084
GO:0032272 negative regulation of protein polymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0043242 negative regulation of protein-containing complex disassembly 1.89% (1/53) 8.64 0.002511 0.010672
GO:0031984 organelle subcompartment 1.89% (1/53) 8.64 0.002511 0.010672
GO:0051016 barbed-end actin filament capping 1.89% (1/53) 8.64 0.002511 0.010672
GO:0051494 negative regulation of cytoskeleton organization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0051693 actin filament capping 1.89% (1/53) 8.64 0.002511 0.010672
GO:1901879 regulation of protein depolymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0031333 negative regulation of protein-containing complex assembly 1.89% (1/53) 8.64 0.002511 0.010672
GO:0030837 negative regulation of actin filament polymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0030835 negative regulation of actin filament depolymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0061929 gamma-glutamylaminecyclotransferase activity 1.89% (1/53) 8.64 0.002511 0.010672
GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity 1.89% (1/53) 8.64 0.002511 0.010672
GO:0098791 Golgi apparatus subcompartment 1.89% (1/53) 8.64 0.002511 0.010672
GO:0030834 regulation of actin filament depolymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0004046 aminoacylase activity 1.89% (1/53) 8.64 0.002511 0.010672
GO:0008290 F-actin capping protein complex 1.89% (1/53) 8.64 0.002511 0.010672
GO:1901880 negative regulation of protein depolymerization 1.89% (1/53) 8.64 0.002511 0.010672
GO:1902904 negative regulation of supramolecular fiber organization 1.89% (1/53) 8.64 0.002511 0.010672
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 1.89% (1/53) 8.64 0.002511 0.010672
GO:0046483 heterocycle metabolic process 13.21% (7/53) 1.89 0.002683 0.011282
GO:0008152 metabolic process 33.96% (18/53) 0.99 0.002192 0.01174
GO:0071704 organic substance metabolic process 32.08% (17/53) 1.0 0.002878 0.011973
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 3.77% (2/53) 4.64 0.00297 0.012223
GO:1901360 organic cyclic compound metabolic process 13.21% (7/53) 1.82 0.003462 0.014101
GO:0005488 binding 45.28% (24/53) 0.73 0.003599 0.014509
GO:0045048 protein insertion into ER membrane 1.89% (1/53) 8.05 0.003764 0.014718
GO:0004807 triose-phosphate isomerase activity 1.89% (1/53) 8.05 0.003764 0.014718
GO:0051205 protein insertion into membrane 1.89% (1/53) 8.05 0.003764 0.014718
GO:0051017 actin filament bundle assembly 1.89% (1/53) 7.64 0.005016 0.01904
GO:0061572 actin filament bundle organization 1.89% (1/53) 7.64 0.005016 0.01904
GO:0016151 nickel cation binding 1.89% (1/53) 7.64 0.005016 0.01904
GO:0035999 tetrahydrofolate interconversion 1.89% (1/53) 7.31 0.006266 0.022897
GO:0004372 glycine hydroxymethyltransferase activity 1.89% (1/53) 7.31 0.006266 0.022897
GO:0019264 glycine biosynthetic process from serine 1.89% (1/53) 7.31 0.006266 0.022897
GO:0006545 glycine biosynthetic process 1.89% (1/53) 7.31 0.006266 0.022897
GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity 1.89% (1/53) 7.05 0.007514 0.025773
GO:0030291 protein serine/threonine kinase inhibitor activity 1.89% (1/53) 7.05 0.007514 0.025773
GO:1904030 negative regulation of cyclin-dependent protein kinase activity 1.89% (1/53) 7.05 0.007514 0.025773
GO:0004860 protein kinase inhibitor activity 1.89% (1/53) 7.05 0.007514 0.025773
GO:0007031 peroxisome organization 1.89% (1/53) 7.05 0.007514 0.025773
GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity 1.89% (1/53) 7.05 0.007514 0.025773
GO:0006486 protein glycosylation 3.77% (2/53) 3.91 0.007927 0.026719
GO:0043413 macromolecule glycosylation 3.77% (2/53) 3.91 0.007927 0.026719
GO:0016757 glycosyltransferase activity 7.55% (4/53) 2.37 0.007406 0.026814
GO:0070085 glycosylation 3.77% (2/53) 3.86 0.008512 0.028446
GO:0006730 one-carbon metabolic process 1.89% (1/53) 6.83 0.008761 0.028787
GO:0043244 regulation of protein-containing complex disassembly 1.89% (1/53) 6.83 0.008761 0.028787
GO:0044238 primary metabolic process 28.3% (15/53) 0.93 0.008879 0.028931
GO:0046653 tetrahydrofolate metabolic process 1.89% (1/53) 6.64 0.010007 0.030331
GO:0033673 negative regulation of kinase activity 1.89% (1/53) 6.64 0.010007 0.030331
GO:0033180 proton-transporting V-type ATPase, V1 domain 1.89% (1/53) 6.64 0.010007 0.030331
GO:0008375 acetylglucosaminyltransferase activity 1.89% (1/53) 6.64 0.010007 0.030331
GO:0006469 negative regulation of protein kinase activity 1.89% (1/53) 6.64 0.010007 0.030331
GO:0070569 uridylyltransferase activity 1.89% (1/53) 6.64 0.010007 0.030331
GO:0071901 negative regulation of protein serine/threonine kinase activity 1.89% (1/53) 6.64 0.010007 0.030331
GO:0001933 negative regulation of protein phosphorylation 1.89% (1/53) 6.64 0.010007 0.030331
GO:0042326 negative regulation of phosphorylation 1.89% (1/53) 6.64 0.010007 0.030331
GO:0042727 flavin-containing compound biosynthetic process 1.89% (1/53) 6.47 0.011251 0.030762
GO:0042726 flavin-containing compound metabolic process 1.89% (1/53) 6.47 0.011251 0.030762
GO:0019239 deaminase activity 1.89% (1/53) 6.47 0.011251 0.030762
GO:0006771 riboflavin metabolic process 1.89% (1/53) 6.47 0.011251 0.030762
GO:0110053 regulation of actin filament organization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0051129 negative regulation of cellular component organization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0030832 regulation of actin filament length 1.89% (1/53) 6.47 0.011251 0.030762
GO:0010639 negative regulation of organelle organization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0032956 regulation of actin cytoskeleton organization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0008064 regulation of actin polymerization or depolymerization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0032970 regulation of actin filament-based process 1.89% (1/53) 6.47 0.011251 0.030762
GO:0030833 regulation of actin filament polymerization 1.89% (1/53) 6.47 0.011251 0.030762
GO:0016842 amidine-lyase activity 1.89% (1/53) 6.47 0.011251 0.030762
GO:0009231 riboflavin biosynthetic process 1.89% (1/53) 6.47 0.011251 0.030762
GO:0051348 negative regulation of transferase activity 1.89% (1/53) 6.31 0.012493 0.032137
GO:0033500 carbohydrate homeostasis 1.89% (1/53) 6.31 0.012493 0.032137
GO:0042593 glucose homeostasis 1.89% (1/53) 6.31 0.012493 0.032137
GO:1902903 regulation of supramolecular fiber organization 1.89% (1/53) 6.31 0.012493 0.032137
GO:0032271 regulation of protein polymerization 1.89% (1/53) 6.31 0.012493 0.032137
GO:0043254 regulation of protein-containing complex assembly 1.89% (1/53) 6.31 0.012493 0.032137
GO:0005536 glucose binding 1.89% (1/53) 6.31 0.012493 0.032137
GO:0004396 hexokinase activity 1.89% (1/53) 6.31 0.012493 0.032137
GO:0001678 intracellular glucose homeostasis 1.89% (1/53) 6.31 0.012493 0.032137
GO:0006793 phosphorus metabolic process 13.21% (7/53) 1.46 0.012836 0.032172
GO:0043167 ion binding 24.53% (13/53) 0.96 0.012783 0.032247
GO:0006796 phosphate-containing compound metabolic process 13.21% (7/53) 1.47 0.012643 0.032311
GO:0006725 cellular aromatic compound metabolic process 11.32% (6/53) 1.63 0.012747 0.032364
GO:0006544 glycine metabolic process 1.89% (1/53) 6.18 0.013734 0.033354
GO:0090066 regulation of anatomical structure size 1.89% (1/53) 6.18 0.013734 0.033354
GO:0010563 negative regulation of phosphorus metabolic process 1.89% (1/53) 6.18 0.013734 0.033354
GO:0045936 negative regulation of phosphate metabolic process 1.89% (1/53) 6.18 0.013734 0.033354
GO:0032535 regulation of cellular component size 1.89% (1/53) 6.18 0.013734 0.033354
GO:0031400 negative regulation of protein modification process 1.89% (1/53) 5.94 0.016211 0.03865
GO:0140103 catalytic activity, acting on a glycoprotein 1.89% (1/53) 5.94 0.016211 0.03865
GO:0019210 kinase inhibitor activity 1.89% (1/53) 5.94 0.016211 0.03865
GO:0044092 negative regulation of molecular function 1.89% (1/53) 5.83 0.017447 0.039894
GO:0043086 negative regulation of catalytic activity 1.89% (1/53) 5.83 0.017447 0.039894
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.89% (1/53) 5.83 0.017447 0.039894
GO:0070006 metalloaminopeptidase activity 1.89% (1/53) 5.83 0.017447 0.039894
GO:0019932 second-messenger-mediated signaling 1.89% (1/53) 5.83 0.017447 0.039894
GO:0019722 calcium-mediated signaling 1.89% (1/53) 5.83 0.017447 0.039894
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.89% (1/53) 5.83 0.017447 0.039894
GO:0004707 MAP kinase activity 1.89% (1/53) 5.73 0.018682 0.042469
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 1.89% (1/53) 5.64 0.019915 0.044752
GO:0006760 folic acid-containing compound metabolic process 1.89% (1/53) 5.64 0.019915 0.044752
GO:0004177 aminopeptidase activity 1.89% (1/53) 5.55 0.021147 0.04698
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.89% (1/53) 5.55 0.021147 0.04698
GO:0048523 negative regulation of cellular process 3.77% (2/53) 3.14 0.021858 0.048285
GO:0008235 metalloexopeptidase activity 1.89% (1/53) 5.47 0.022377 0.048608
GO:0042558 pteridine-containing compound metabolic process 1.89% (1/53) 5.47 0.022377 0.048608
GO:0046914 transition metal ion binding 9.43% (5/53) 1.63 0.02221 0.048788
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (53) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms