Coexpression cluster: Cluster_303 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 72.73% (56/77) 0.77 0.0 4e-05
GO:1901576 organic substance biosynthetic process 15.58% (12/77) 2.2 1.1e-05 0.002341
GO:0009058 biosynthetic process 15.58% (12/77) 2.08 2.5e-05 0.003539
GO:0006629 lipid metabolic process 9.09% (7/77) 2.81 6.6e-05 0.007063
GO:0070568 guanylyltransferase activity 2.6% (2/77) 6.93 0.000117 0.010072
GO:0043603 amide metabolic process 7.79% (6/77) 2.89 0.000162 0.011566
GO:0003824 catalytic activity 40.26% (31/77) 0.87 0.000236 0.012647
GO:0008150 biological_process 48.05% (37/77) 0.73 0.000288 0.01373
GO:0044238 primary metabolic process 31.17% (24/77) 1.06 0.000234 0.014356
GO:0071704 organic substance metabolic process 31.17% (24/77) 0.96 0.000706 0.027525
GO:0044271 cellular nitrogen compound biosynthetic process 9.09% (7/77) 2.19 0.000881 0.029089
GO:0044249 cellular biosynthetic process 11.69% (9/77) 1.89 0.000691 0.029625
GO:0006518 peptide metabolic process 6.49% (5/77) 2.78 0.000834 0.029825
GO:0016779 nucleotidyltransferase activity 3.9% (3/77) 3.61 0.001972 0.033833
GO:1901135 carbohydrate derivative metabolic process 5.19% (4/77) 2.94 0.001898 0.033924
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 2.6% (2/77) 4.97 0.001881 0.035091
GO:0034641 cellular nitrogen compound metabolic process 12.99% (10/77) 1.55 0.002153 0.035521
GO:0009626 plant-type hypersensitive response 1.3% (1/77) 9.1 0.001825 0.03559
GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex 1.3% (1/77) 9.1 0.001825 0.03559
GO:0051702 biological process involved in interaction with symbiont 1.3% (1/77) 9.1 0.001825 0.03559
GO:0033061 DNA recombinase mediator complex 1.3% (1/77) 9.1 0.001825 0.03559
GO:0034050 programmed cell death induced by symbiont 1.3% (1/77) 9.1 0.001825 0.03559
GO:0004252 serine-type endopeptidase activity 3.9% (3/77) 3.74 0.001511 0.043226
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0050307 sucrose-phosphate phosphatase activity 1.3% (1/77) 7.51 0.005465 0.04342
GO:0004421 hydroxymethylglutaryl-CoA synthase activity 1.3% (1/77) 7.51 0.005465 0.04342
GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0009162 deoxyribonucleoside monophosphate metabolic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 1.3% (1/77) 7.51 0.005465 0.04342
GO:0045337 farnesyl diphosphate biosynthetic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0045338 farnesyl diphosphate metabolic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity 1.3% (1/77) 7.51 0.005465 0.04342
GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0080048 GDP-D-glucose phosphorylase activity 1.3% (1/77) 7.51 0.005465 0.04342
GO:1902767 isoprenoid biosynthetic process via mevalonate 1.3% (1/77) 7.51 0.005465 0.04342
GO:0005094 Rho GDP-dissociation inhibitor activity 1.3% (1/77) 7.51 0.005465 0.04342
GO:0046654 tetrahydrofolate biosynthetic process 1.3% (1/77) 7.51 0.005465 0.04342
GO:0004146 dihydrofolate reductase activity 1.3% (1/77) 8.1 0.003647 0.043459
GO:0006231 dTMP biosynthetic process 1.3% (1/77) 8.1 0.003647 0.043459
GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity 1.3% (1/77) 8.1 0.003647 0.043459
GO:0044403 biological process involved in symbiotic interaction 1.3% (1/77) 8.1 0.003647 0.043459
GO:0004496 mevalonate kinase activity 1.3% (1/77) 8.1 0.003647 0.043459
GO:0004799 thymidylate synthase activity 1.3% (1/77) 8.1 0.003647 0.043459
GO:0046073 dTMP metabolic process 1.3% (1/77) 8.1 0.003647 0.043459
GO:0004506 squalene monooxygenase activity 1.3% (1/77) 8.1 0.003647 0.043459
GO:0008236 serine-type peptidase activity 3.9% (3/77) 3.06 0.005692 0.043603
GO:0017171 serine hydrolase activity 3.9% (3/77) 3.06 0.005692 0.043603
GO:0008152 metabolic process 31.17% (24/77) 0.87 0.00173 0.043659
GO:0055086 nucleobase-containing small molecule metabolic process 5.19% (4/77) 3.04 0.001477 0.045271
GO:0016740 transferase activity 19.48% (15/77) 1.13 0.002871 0.045616
GO:0008610 lipid biosynthetic process 5.19% (4/77) 2.98 0.001712 0.045899
GO:0019902 phosphatase binding 1.3% (1/77) 7.1 0.007281 0.045933
GO:0009394 2'-deoxyribonucleotide metabolic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0009265 2'-deoxyribonucleotide biosynthetic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0009219 pyrimidine deoxyribonucleotide metabolic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0030259 lipid glycosylation 1.3% (1/77) 7.1 0.007281 0.045933
GO:0046385 deoxyribose phosphate biosynthetic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0019692 deoxyribose phosphate metabolic process 1.3% (1/77) 7.1 0.007281 0.045933
GO:0090114 COPII-coated vesicle budding 1.3% (1/77) 7.1 0.007281 0.045933
GO:0019903 protein phosphatase binding 1.3% (1/77) 7.1 0.007281 0.045933
GO:0006900 vesicle budding from membrane 1.3% (1/77) 7.1 0.007281 0.045933
GO:0009117 nucleotide metabolic process 3.9% (3/77) 2.9 0.007707 0.047915
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 1.3% (1/77) 6.78 0.009093 0.048158
GO:0006955 immune response 1.3% (1/77) 6.78 0.009093 0.048158
GO:0016126 sterol biosynthetic process 1.3% (1/77) 6.78 0.009093 0.048158
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 1.3% (1/77) 6.78 0.009093 0.048158
GO:0045087 innate immune response 1.3% (1/77) 6.78 0.009093 0.048158
GO:0005198 structural molecule activity 5.19% (4/77) 2.35 0.008088 0.048192
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.69% (9/77) 1.36 0.008219 0.048302
GO:0009059 macromolecule biosynthetic process 6.49% (5/77) 2.01 0.008071 0.048765
GO:0016491 oxidoreductase activity 10.39% (8/77) 1.46 0.008642 0.048783
GO:0043228 non-membrane-bounded organelle 5.19% (4/77) 2.32 0.008547 0.048888
GO:0043232 intracellular non-membrane-bounded organelle 5.19% (4/77) 2.32 0.008547 0.048888
GO:0006753 nucleoside phosphate metabolic process 3.9% (3/77) 2.88 0.007996 0.049007
GO:0043604 amide biosynthetic process 5.19% (4/77) 2.43 0.00664 0.049972
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (77) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms