Coexpression cluster: Cluster_115 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005515 protein binding 73.91% (85/115) 2.88 0.0 0.0
GO:0005488 binding 90.43% (104/115) 1.73 0.0 0.0
GO:0003674 molecular_function 92.17% (106/115) 1.11 0.0 0.0
GO:0009451 RNA modification 9.57% (11/115) 4.68 0.0 0.0
GO:0008270 zinc ion binding 13.91% (16/115) 3.08 0.0 0.0
GO:0003723 RNA binding 13.04% (15/115) 2.82 0.0 0.0
GO:0090304 nucleic acid metabolic process 13.04% (15/115) 2.34 0.0 1e-05
GO:0046914 transition metal ion binding 13.91% (16/115) 2.19 0.0 1.3e-05
GO:0046483 heterocycle metabolic process 14.78% (17/115) 2.05 1e-06 1.9e-05
GO:0006139 nucleobase-containing compound metabolic process 13.91% (16/115) 2.09 1e-06 2.6e-05
GO:1901360 organic cyclic compound metabolic process 14.78% (17/115) 1.98 1e-06 2.9e-05
GO:0046872 metal ion binding 16.52% (19/115) 1.78 3e-06 4.9e-05
GO:0043169 cation binding 16.52% (19/115) 1.73 4e-06 7.3e-05
GO:0006725 cellular aromatic compound metabolic process 13.91% (16/115) 1.92 5e-06 8.1e-05
GO:0016070 RNA metabolic process 9.57% (11/115) 2.43 7e-06 0.000103
GO:0034641 cellular nitrogen compound metabolic process 14.78% (17/115) 1.73 1.4e-05 0.000196
GO:0003676 nucleic acid binding 18.26% (21/115) 1.49 1.5e-05 0.00021
GO:0043167 ion binding 24.35% (28/115) 0.95 0.000411 0.005271
GO:0004141 dethiobiotin synthase activity 0.87% (1/115) 8.52 0.002726 0.027377
GO:0043625 delta DNA polymerase complex 0.87% (1/115) 8.52 0.002726 0.027377
GO:0004794 L-threonine ammonia-lyase activity 0.87% (1/115) 8.52 0.002726 0.027377
GO:0004070 aspartate carbamoyltransferase activity 0.87% (1/115) 8.52 0.002726 0.027377
GO:0031422 RecQ family helicase-topoisomerase III complex 0.87% (1/115) 8.52 0.002726 0.027377
GO:0097159 organic cyclic compound binding 26.09% (30/115) 0.73 0.002956 0.028454
GO:0006549 isoleucine metabolic process 0.87% (1/115) 7.52 0.005444 0.040569
GO:0009102 biotin biosynthetic process 0.87% (1/115) 7.52 0.005444 0.040569
GO:0016597 amino acid binding 0.87% (1/115) 7.52 0.005444 0.040569
GO:0009097 isoleucine biosynthetic process 0.87% (1/115) 7.52 0.005444 0.040569
GO:0016882 cyclo-ligase activity 0.87% (1/115) 7.52 0.005444 0.040569
GO:0016743 carboxyl- or carbamoyltransferase activity 0.87% (1/115) 7.52 0.005444 0.040569
GO:0006768 biotin metabolic process 0.87% (1/115) 7.52 0.005444 0.040569
GO:0140658 ATP-dependent chromatin remodeler activity 1.74% (2/115) 4.16 0.005635 0.040676
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (115) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms