Coexpression cluster: Cluster_37 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004672 protein kinase activity 13.18% (29/220) 1.84 0.0 0.0
GO:0003700 DNA-binding transcription factor activity 9.55% (21/220) 2.28 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 19.09% (42/220) 1.41 0.0 0.0
GO:0036211 protein modification process 15.91% (35/220) 1.63 0.0 0.0
GO:0016310 phosphorylation 13.18% (29/220) 1.86 0.0 0.0
GO:0140110 transcription regulator activity 9.55% (21/220) 2.18 0.0 0.0
GO:0006468 protein phosphorylation 13.18% (29/220) 1.87 0.0 1e-06
GO:0043412 macromolecule modification 15.91% (35/220) 1.52 0.0 1e-06
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.18% (29/220) 1.73 0.0 1e-06
GO:0016301 kinase activity 13.18% (29/220) 1.68 0.0 1e-06
GO:0006793 phosphorus metabolic process 13.64% (30/220) 1.51 0.0 6e-06
GO:0006796 phosphate-containing compound metabolic process 13.64% (30/220) 1.51 0.0 6e-06
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.18% (29/220) 1.53 0.0 7e-06
GO:0097159 organic cyclic compound binding 28.64% (63/220) 0.86 1e-06 1.8e-05
GO:0003677 DNA binding 10.45% (23/220) 1.65 1e-06 2.4e-05
GO:0051252 regulation of RNA metabolic process 10.0% (22/220) 1.69 2e-06 2.5e-05
GO:0006355 regulation of DNA-templated transcription 10.0% (22/220) 1.7 1e-06 2.5e-05
GO:2001141 regulation of RNA biosynthetic process 10.0% (22/220) 1.7 1e-06 2.5e-05
GO:0019219 regulation of nucleobase-containing compound metabolic process 10.0% (22/220) 1.68 2e-06 2.7e-05
GO:0019538 protein metabolic process 18.18% (40/220) 1.11 3e-06 4.1e-05
GO:0050789 regulation of biological process 13.18% (29/220) 1.35 4e-06 5e-05
GO:0009889 regulation of biosynthetic process 10.0% (22/220) 1.56 7e-06 6.6e-05
GO:0031326 regulation of cellular biosynthetic process 10.0% (22/220) 1.56 7e-06 6.6e-05
GO:0010556 regulation of macromolecule biosynthetic process 10.0% (22/220) 1.56 6e-06 6.9e-05
GO:0080090 regulation of primary metabolic process 10.0% (22/220) 1.57 6e-06 7e-05
GO:0010468 regulation of gene expression 10.0% (22/220) 1.57 6e-06 7e-05
GO:0065007 biological regulation 13.18% (29/220) 1.32 6e-06 7.3e-05
GO:0051171 regulation of nitrogen compound metabolic process 10.0% (22/220) 1.57 6e-06 7.5e-05
GO:0050794 regulation of cellular process 12.27% (27/220) 1.33 1.1e-05 9.9e-05
GO:0016740 transferase activity 18.18% (40/220) 1.04 1e-05 9.9e-05
GO:0060255 regulation of macromolecule metabolic process 10.0% (22/220) 1.5 1.4e-05 0.000118
GO:0031323 regulation of cellular metabolic process 10.0% (22/220) 1.5 1.4e-05 0.000118
GO:0019222 regulation of metabolic process 10.0% (22/220) 1.48 1.6e-05 0.000139
GO:0005524 ATP binding 12.73% (28/220) 1.15 6.6e-05 0.000542
GO:0043167 ion binding 21.82% (48/220) 0.79 9.5e-05 0.000758
GO:0035639 purine ribonucleoside triphosphate binding 13.18% (29/220) 1.09 0.00011 0.000849
GO:0005488 binding 38.64% (85/220) 0.51 0.000147 0.001107
GO:1901564 organonitrogen compound metabolic process 18.18% (40/220) 0.85 0.000188 0.001377
GO:0004842 ubiquitin-protein transferase activity 3.18% (7/220) 2.53 0.000238 0.001702
GO:0003824 catalytic activity 32.27% (71/220) 0.55 0.000275 0.001916
GO:0019787 ubiquitin-like protein transferase activity 3.18% (7/220) 2.48 0.000285 0.001937
GO:0016755 aminoacyltransferase activity 3.18% (7/220) 2.46 0.000315 0.002089
GO:0061630 ubiquitin protein ligase activity 2.27% (5/220) 3.08 0.000327 0.002124
GO:0061659 ubiquitin-like protein ligase activity 2.27% (5/220) 3.07 0.000341 0.002162
GO:0032559 adenyl ribonucleotide binding 13.18% (29/220) 0.95 0.000543 0.003369
GO:0003674 molecular_function 53.64% (118/220) 0.33 0.000715 0.004242
GO:0008150 biological_process 39.09% (86/220) 0.44 0.000704 0.004268
GO:0032555 purine ribonucleotide binding 13.64% (30/220) 0.9 0.000765 0.004445
GO:0032553 ribonucleotide binding 13.64% (30/220) 0.88 0.000896 0.005104
GO:0043170 macromolecule metabolic process 18.64% (41/220) 0.72 0.000918 0.005123
GO:0097367 carbohydrate derivative binding 13.64% (30/220) 0.87 0.001016 0.005561
GO:0030554 adenyl nucleotide binding 13.18% (29/220) 0.88 0.001103 0.005921
GO:0017076 purine nucleotide binding 13.64% (30/220) 0.83 0.00153 0.008052
GO:0043168 anion binding 14.09% (31/220) 0.79 0.001946 0.010054
GO:0009873 ethylene-activated signaling pathway 1.36% (3/220) 3.47 0.002561 0.01299
GO:1901363 heterocyclic compound binding 14.09% (31/220) 0.75 0.002908 0.014488
GO:0140352 export from cell 1.82% (4/220) 2.76 0.002973 0.014552
GO:0000166 nucleotide binding 13.64% (30/220) 0.76 0.003122 0.014763
GO:1901265 nucleoside phosphate binding 13.64% (30/220) 0.76 0.003122 0.014763
GO:0036094 small molecule binding 14.09% (31/220) 0.74 0.003231 0.015025
GO:0006887 exocytosis 1.36% (3/220) 3.26 0.003846 0.01759
GO:0032940 secretion by cell 1.36% (3/220) 3.24 0.00403 0.017845
GO:0000145 exocyst 1.36% (3/220) 3.24 0.00403 0.017845
GO:0007165 signal transduction 3.64% (8/220) 1.66 0.004265 0.018592
GO:0046903 secretion 1.36% (3/220) 3.15 0.004817 0.020674
GO:0009755 hormone-mediated signaling pathway 1.82% (4/220) 2.56 0.004898 0.020705
GO:0052736 beta-glucanase activity 0.45% (1/220) 7.58 0.005215 0.021395
GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group 0.45% (1/220) 7.58 0.005215 0.021395
GO:0043565 sequence-specific DNA binding 2.73% (6/220) 1.87 0.006423 0.025598
GO:0005484 SNAP receptor activity 0.91% (2/220) 4.06 0.006372 0.025764
GO:0043169 cation binding 9.09% (20/220) 0.87 0.007276 0.02859
GO:0099023 vesicle tethering complex 1.36% (3/220) 2.88 0.007984 0.03094
GO:0030674 protein-macromolecule adaptor activity 0.91% (2/220) 3.83 0.00872 0.033326
GO:0003676 nucleic acid binding 10.91% (24/220) 0.75 0.009269 0.034948
GO:0060090 molecular adaptor activity 0.91% (2/220) 3.73 0.010018 0.037265
GO:0046872 metal ion binding 8.64% (19/220) 0.84 0.010574 0.038816
GO:0006807 nitrogen compound metabolic process 18.18% (40/220) 0.53 0.01105 0.04004
GO:0030246 carbohydrate binding 2.73% (6/220) 1.69 0.011457 0.04098
GO:0020037 heme binding 3.64% (8/220) 1.4 0.011948 0.042196
GO:0046906 tetrapyrrole binding 3.64% (8/220) 1.37 0.012997 0.044769
GO:0030312 external encapsulating structure 0.91% (2/220) 3.54 0.012851 0.044819
GO:0007166 cell surface receptor signaling pathway 1.82% (4/220) 2.12 0.014119 0.048039
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (220) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms