Coexpression cluster: Cluster_195 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005787 signal peptidase complex 3.33% (2/60) 7.87 3e-05 0.007074
GO:0006518 peptide metabolic process 8.33% (5/60) 3.14 0.000263 0.008938
GO:0005739 mitochondrion 3.33% (2/60) 6.46 0.000236 0.009347
GO:0006465 signal peptide processing 3.33% (2/60) 6.46 0.000236 0.009347
GO:0008380 RNA splicing 5.0% (3/60) 4.47 0.000345 0.010259
GO:0043603 amide metabolic process 8.33% (5/60) 2.99 0.00042 0.011098
GO:0000375 RNA splicing, via transesterification reactions 5.0% (3/60) 4.7 0.000216 0.012828
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 5.0% (3/60) 4.78 0.000186 0.014723
GO:1905368 peptidase complex 3.33% (2/60) 5.76 0.000632 0.01505
GO:0016722 oxidoreductase activity, acting on metal ions 1.67% (1/60) 9.46 0.001422 0.015385
GO:0016724 oxidoreductase activity, acting on metal ions, oxygen as acceptor 1.67% (1/60) 9.46 0.001422 0.015385
GO:0019400 alditol metabolic process 1.67% (1/60) 9.46 0.001422 0.015385
GO:0004371 glycerone kinase activity 1.67% (1/60) 9.46 0.001422 0.015385
GO:0006071 glycerol metabolic process 1.67% (1/60) 9.46 0.001422 0.015385
GO:0004322 ferroxidase activity 1.67% (1/60) 9.46 0.001422 0.015385
GO:0140534 endoplasmic reticulum protein-containing complex 3.33% (2/60) 5.55 0.000843 0.015438
GO:0006397 mRNA processing 5.0% (3/60) 4.05 0.000804 0.01595
GO:0016485 protein processing 3.33% (2/60) 5.46 0.00096 0.016316
GO:0000398 mRNA splicing, via spliceosome 5.0% (3/60) 4.91 0.00014 0.016644
GO:1901681 sulfur compound binding 3.33% (2/60) 5.6 0.000788 0.017045
GO:1902494 catalytic complex 6.67% (4/60) 3.12 0.001173 0.018619
GO:0051604 protein maturation 3.33% (2/60) 4.97 0.001893 0.019589
GO:0016071 mRNA metabolic process 5.0% (3/60) 3.78 0.001401 0.020844
GO:0043229 intracellular organelle 10.0% (6/60) 2.15 0.002296 0.021861
GO:0043226 organelle 10.0% (6/60) 2.15 0.002296 0.021861
GO:0031417 NatC complex 1.67% (1/60) 8.46 0.002842 0.026018
GO:0005575 cellular_component 20.0% (12/60) 1.26 0.003558 0.031366
GO:0031414 N-terminal protein acetyltransferase complex 1.67% (1/60) 7.87 0.004261 0.0338
GO:0051205 protein insertion into membrane 1.67% (1/60) 7.87 0.004261 0.0338
GO:0045048 protein insertion into ER membrane 1.67% (1/60) 7.87 0.004261 0.0338
GO:0044183 protein folding chaperone 1.67% (1/60) 7.46 0.005677 0.034643
GO:0042753 positive regulation of circadian rhythm 1.67% (1/60) 7.46 0.005677 0.034643
GO:0032366 intracellular sterol transport 1.67% (1/60) 7.46 0.005677 0.034643
GO:0015918 sterol transport 1.67% (1/60) 7.46 0.005677 0.034643
GO:0015850 organic hydroxy compound transport 1.67% (1/60) 7.46 0.005677 0.034643
GO:0061572 actin filament bundle organization 1.67% (1/60) 7.46 0.005677 0.034643
GO:0051017 actin filament bundle assembly 1.67% (1/60) 7.46 0.005677 0.034643
GO:0008199 ferric iron binding 1.67% (1/60) 7.46 0.005677 0.034643
GO:0045292 mRNA cis splicing, via spliceosome 1.67% (1/60) 7.14 0.007091 0.037504
GO:0008320 protein transmembrane transporter activity 1.67% (1/60) 7.14 0.007091 0.037504
GO:0022884 macromolecule transmembrane transporter activity 1.67% (1/60) 7.14 0.007091 0.037504
GO:0030176 obsolete integral component of endoplasmic reticulum membrane 1.67% (1/60) 7.14 0.007091 0.037504
GO:0032365 intracellular lipid transport 1.67% (1/60) 7.14 0.007091 0.037504
GO:0140318 protein transporter activity 1.67% (1/60) 7.14 0.007091 0.037504
GO:0034641 cellular nitrogen compound metabolic process 13.33% (8/60) 1.58 0.004938 0.037909
GO:0098796 membrane protein complex 5.0% (3/60) 2.87 0.008087 0.041839
GO:0009269 response to desiccation 1.67% (1/60) 6.65 0.009914 0.049155
GO:0009414 response to water deprivation 1.67% (1/60) 6.65 0.009914 0.049155
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (60) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms