Coexpression cluster: Cluster_100 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0022402 cell cycle process 8.11% (15/185) 5.26 0.0 0.0
GO:0008017 microtubule binding 6.49% (12/185) 4.41 0.0 0.0
GO:0015631 tubulin binding 6.49% (12/185) 4.28 0.0 0.0
GO:0030261 chromosome condensation 2.7% (5/185) 7.83 0.0 0.0
GO:0008092 cytoskeletal protein binding 7.57% (14/185) 3.87 0.0 0.0
GO:1903047 mitotic cell cycle process 3.78% (7/185) 6.06 0.0 0.0
GO:0007018 microtubule-based movement 4.32% (8/185) 5.22 0.0 0.0
GO:0007076 mitotic chromosome condensation 2.16% (4/185) 7.83 0.0 0.0
GO:0003777 microtubule motor activity 4.32% (8/185) 4.53 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 18.92% (35/185) 1.61 0.0 0.0
GO:0005524 ATP binding 17.84% (33/185) 1.64 0.0 0.0
GO:0003774 cytoskeletal motor activity 4.32% (8/185) 4.29 0.0 0.0
GO:0006996 organelle organization 6.49% (12/185) 3.2 0.0 0.0
GO:0140657 ATP-dependent activity 8.11% (15/185) 2.67 0.0 1e-06
GO:0007059 chromosome segregation 2.16% (4/185) 6.66 0.0 1e-06
GO:0007017 microtubule-based process 4.32% (8/185) 3.96 0.0 2e-06
GO:0032555 purine ribonucleotide binding 19.46% (36/185) 1.41 0.0 2e-06
GO:0032553 ribonucleotide binding 19.46% (36/185) 1.39 0.0 2e-06
GO:0097367 carbohydrate derivative binding 19.46% (36/185) 1.38 0.0 3e-06
GO:0032559 adenyl ribonucleotide binding 18.38% (34/185) 1.43 0.0 3e-06
GO:0017076 purine nucleotide binding 19.46% (36/185) 1.34 0.0 4e-06
GO:0005515 protein binding 22.7% (42/185) 1.18 0.0 7e-06
GO:0030554 adenyl nucleotide binding 18.38% (34/185) 1.36 0.0 8e-06
GO:1901265 nucleoside phosphate binding 19.46% (36/185) 1.28 1e-06 1.2e-05
GO:0000166 nucleotide binding 19.46% (36/185) 1.28 1e-06 1.2e-05
GO:0061983 meiosis II cell cycle process 1.62% (3/185) 7.1 1e-06 1.4e-05
GO:0007135 meiosis II 1.62% (3/185) 7.1 1e-06 1.4e-05
GO:0007142 male meiosis II 1.62% (3/185) 7.1 1e-06 1.4e-05
GO:0043168 anion binding 19.46% (36/185) 1.26 1e-06 1.5e-05
GO:0051276 chromosome organization 3.78% (7/185) 3.76 1e-06 1.6e-05
GO:0071840 cellular component organization or biogenesis 8.11% (15/185) 2.21 1e-06 1.8e-05
GO:1901363 heterocyclic compound binding 19.46% (36/185) 1.22 1e-06 2.3e-05
GO:0016043 cellular component organization 7.57% (14/185) 2.26 2e-06 2.5e-05
GO:0036094 small molecule binding 19.46% (36/185) 1.21 2e-06 2.5e-05
GO:0010564 regulation of cell cycle process 2.7% (5/185) 4.18 9e-06 0.000123
GO:1903046 meiotic cell cycle process 2.16% (4/185) 4.88 1e-05 0.000136
GO:0022414 reproductive process 2.7% (5/185) 4.13 1e-05 0.000139
GO:0022412 cellular process involved in reproduction in multicellular organism 1.62% (3/185) 5.96 1.3e-05 0.000159
GO:0007140 male meiotic nuclear division 1.62% (3/185) 5.96 1.3e-05 0.000159
GO:0000280 nuclear division 1.62% (3/185) 5.96 1.3e-05 0.000159
GO:0140013 meiotic nuclear division 1.62% (3/185) 5.96 1.3e-05 0.000159
GO:0000796 condensin complex 1.08% (2/185) 7.83 1.9e-05 0.000223
GO:0009987 cellular process 29.19% (54/185) 0.79 2e-05 0.000231
GO:0007346 regulation of mitotic cell cycle 1.62% (3/185) 5.61 2.9e-05 0.000325
GO:0140097 catalytic activity, acting on DNA 3.78% (7/185) 2.99 3.2e-05 0.000351
GO:0051726 regulation of cell cycle 2.7% (5/185) 3.68 4.7e-05 0.000504
GO:0008094 ATP-dependent activity, acting on DNA 3.24% (6/185) 3.22 5e-05 0.000518
GO:1901987 regulation of cell cycle phase transition 1.62% (3/185) 5.25 6.4e-05 0.000658
GO:0043138 3'-5' DNA helicase activity 1.08% (2/185) 6.83 0.000114 0.001141
GO:0033043 regulation of organelle organization 2.16% (4/185) 3.9 0.000154 0.001506
GO:0048285 organelle fission 1.62% (3/185) 4.77 0.000178 0.001707
GO:0031262 Ndc80 complex 1.08% (2/185) 6.51 0.00019 0.001787
GO:0090329 regulation of DNA-templated DNA replication 1.08% (2/185) 6.25 0.000284 0.002622
GO:0005488 binding 38.92% (72/185) 0.52 0.00035 0.003178
GO:1903320 regulation of protein modification by small protein conjugation or removal 1.08% (2/185) 6.03 0.000396 0.003288
GO:1904666 regulation of ubiquitin protein ligase activity 1.08% (2/185) 6.03 0.000396 0.003288
GO:0051438 regulation of ubiquitin-protein transferase activity 1.08% (2/185) 6.03 0.000396 0.003288
GO:0031396 regulation of protein ubiquitination 1.08% (2/185) 6.03 0.000396 0.003288
GO:0006275 regulation of DNA replication 1.08% (2/185) 6.03 0.000396 0.003288
GO:1901873 regulation of post-translational protein modification 1.08% (2/185) 5.83 0.000526 0.004298
GO:0051128 regulation of cellular component organization 2.16% (4/185) 3.34 0.000682 0.005218
GO:0051783 regulation of nuclear division 1.08% (2/185) 5.66 0.000675 0.005248
GO:0045930 negative regulation of mitotic cell cycle 1.08% (2/185) 5.66 0.000675 0.005248
GO:0007093 mitotic cell cycle checkpoint signaling 1.08% (2/185) 5.66 0.000675 0.005248
GO:0008150 biological_process 40.0% (74/185) 0.47 0.000749 0.005645
GO:0140658 ATP-dependent chromatin remodeler activity 1.62% (3/185) 4.06 0.000782 0.005808
GO:0043167 ion binding 21.08% (39/185) 0.74 0.000824 0.006028
GO:0051052 regulation of DNA metabolic process 1.08% (2/185) 5.51 0.000841 0.00606
GO:0097159 organic cyclic compound binding 24.86% (46/185) 0.66 0.000868 0.006161
GO:1901988 negative regulation of cell cycle phase transition 1.08% (2/185) 5.13 0.001445 0.009569
GO:0000075 cell cycle checkpoint signaling 1.08% (2/185) 5.13 0.001445 0.009569
GO:0010948 negative regulation of cell cycle process 1.08% (2/185) 5.13 0.001445 0.009569
GO:0019210 kinase inhibitor activity 1.08% (2/185) 5.13 0.001445 0.009569
GO:1901990 regulation of mitotic cell cycle phase transition 1.08% (2/185) 5.13 0.001445 0.009569
GO:0048519 negative regulation of biological process 2.7% (5/185) 2.59 0.001563 0.010211
GO:0005634 nucleus 3.78% (7/185) 2.05 0.00166 0.010705
GO:0045786 negative regulation of cell cycle 1.08% (2/185) 4.59 0.003114 0.019814
GO:0018024 obsolete histone lysine N-methyltransferase activity 1.08% (2/185) 4.44 0.003802 0.023884
GO:0007096 regulation of exit from mitosis 0.54% (1/185) 7.83 0.004385 0.025278
GO:0051304 chromosome separation 0.54% (1/185) 7.83 0.004385 0.025278
GO:0008608 attachment of spindle microtubules to kinetochore 0.54% (1/185) 7.83 0.004385 0.025278
GO:2000694 regulation of phragmoplast microtubule organization 0.54% (1/185) 7.83 0.004385 0.025278
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 0.54% (1/185) 7.83 0.004385 0.025278
GO:0004712 protein serine/threonine/tyrosine kinase activity 0.54% (1/185) 7.83 0.004385 0.025278
GO:0045010 actin nucleation 1.08% (2/185) 4.31 0.004554 0.025649
GO:0030029 actin filament-based process 1.08% (2/185) 4.31 0.004554 0.025649
GO:0030036 actin cytoskeleton organization 1.08% (2/185) 4.37 0.00417 0.025865
GO:0019207 kinase regulator activity 1.08% (2/185) 4.13 0.0058 0.031932
GO:0005886 plasma membrane 1.08% (2/185) 4.13 0.0058 0.031932
GO:0003680 minor groove of adenine-thymine-rich DNA binding 1.08% (2/185) 4.03 0.006707 0.036115
GO:0000217 DNA secondary structure binding 1.08% (2/185) 4.03 0.006707 0.036115
GO:0031397 negative regulation of protein ubiquitination 0.54% (1/185) 6.83 0.008751 0.03863
GO:1901874 negative regulation of post-translational protein modification 0.54% (1/185) 6.83 0.008751 0.03863
GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway 0.54% (1/185) 6.83 0.008751 0.03863
GO:1904667 negative regulation of ubiquitin protein ligase activity 0.54% (1/185) 6.83 0.008751 0.03863
GO:0051444 negative regulation of ubiquitin-protein transferase activity 0.54% (1/185) 6.83 0.008751 0.03863
GO:1903321 negative regulation of protein modification by small protein conjugation or removal 0.54% (1/185) 6.83 0.008751 0.03863
GO:0031519 PcG protein complex 0.54% (1/185) 6.83 0.008751 0.03863
GO:0004163 diphosphomevalonate decarboxylase activity 0.54% (1/185) 6.83 0.008751 0.03863
GO:0030174 regulation of DNA-templated DNA replication initiation 0.54% (1/185) 6.83 0.008751 0.03863
GO:0034086 maintenance of sister chromatid cohesion 0.54% (1/185) 6.83 0.008751 0.03863
GO:0071163 DNA replication preinitiation complex assembly 0.54% (1/185) 6.83 0.008751 0.03863
GO:0034090 maintenance of meiotic sister chromatid cohesion 0.54% (1/185) 6.83 0.008751 0.03863
GO:0045144 meiotic sister chromatid segregation 0.54% (1/185) 6.83 0.008751 0.03863
GO:0000940 outer kinetochore 0.54% (1/185) 6.83 0.008751 0.03863
GO:0006468 protein phosphorylation 7.57% (14/185) 1.07 0.007362 0.039212
GO:0004672 protein kinase activity 7.57% (14/185) 1.04 0.008983 0.039299
GO:0051172 negative regulation of nitrogen compound metabolic process 1.62% (3/185) 2.8 0.009302 0.03998
GO:0050789 regulation of biological process 9.73% (18/185) 0.91 0.007619 0.040144
GO:0050794 regulation of cellular process 9.19% (17/185) 0.92 0.009295 0.040305
GO:0043231 intracellular membrane-bounded organelle 3.78% (7/185) 1.63 0.007863 0.040555
GO:0043227 membrane-bounded organelle 3.78% (7/185) 1.63 0.007863 0.040555
GO:0016310 phosphorylation 7.57% (14/185) 1.06 0.008032 0.040995
GO:0065007 biological regulation 9.73% (18/185) 0.88 0.009657 0.041149
GO:0032502 developmental process 2.16% (4/185) 2.27 0.009832 0.04153
GO:0051171 regulation of nitrogen compound metabolic process 7.03% (13/185) 1.06 0.010074 0.04219
GO:0080090 regulation of primary metabolic process 7.03% (13/185) 1.06 0.010351 0.042624
GO:0048523 negative regulation of cellular process 2.16% (4/185) 2.33 0.008483 0.04285
GO:0051015 actin filament binding 1.08% (2/185) 3.7 0.010348 0.042969
GO:0044877 protein-containing complex binding 1.62% (3/185) 2.72 0.010927 0.044248
GO:0051338 regulation of transferase activity 1.08% (2/185) 3.66 0.010925 0.044611
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (185) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms