Coexpression cluster: Cluster_193 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016755 aminoacyltransferase activity 5.19% (8/154) 3.17 4e-06 0.00065
GO:0019787 ubiquitin-like protein transferase activity 5.19% (8/154) 3.19 3e-06 0.000863
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway 1.95% (3/154) 6.22 8e-06 0.001067
GO:0045324 late endosome to vacuole transport 1.95% (3/154) 6.1 1e-05 0.001135
GO:0032509 endosome transport via multivesicular body sorting pathway 1.95% (3/154) 5.98 1.3e-05 0.001226
GO:0004842 ubiquitin-protein transferase activity 5.19% (8/154) 3.23 3e-06 0.001387
GO:0016746 acyltransferase activity 7.14% (11/154) 2.24 2.5e-05 0.001963
GO:0071985 multivesicular body sorting pathway 1.95% (3/154) 5.51 3.7e-05 0.002589
GO:0016197 endosomal transport 1.95% (3/154) 5.16 8e-05 0.004928
GO:0005515 protein binding 20.13% (31/154) 1.0 0.000129 0.007145
GO:0007034 vacuolar transport 1.95% (3/154) 4.88 0.000146 0.007359
GO:0051234 establishment of localization 9.74% (15/154) 1.5 0.000301 0.009279
GO:0043632 modification-dependent macromolecule catabolic process 3.25% (5/154) 3.14 0.000273 0.009457
GO:0006511 ubiquitin-dependent protein catabolic process 3.25% (5/154) 3.14 0.000273 0.009457
GO:0019941 modification-dependent protein catabolic process 3.25% (5/154) 3.14 0.000273 0.009457
GO:0016192 vesicle-mediated transport 3.9% (6/154) 2.75 0.000296 0.009645
GO:0009057 macromolecule catabolic process 3.9% (6/154) 2.69 0.000359 0.009932
GO:0051179 localization 9.74% (15/154) 1.48 0.000343 0.010003
GO:0003674 molecular_function 57.14% (88/154) 0.42 0.00022 0.010135
GO:0008289 lipid binding 3.25% (5/154) 3.04 0.000385 0.010149
GO:0051603 proteolysis involved in protein catabolic process 3.25% (5/154) 2.99 0.00044 0.011084
GO:0006810 transport 9.74% (15/154) 1.52 0.000262 0.011182
GO:0008150 biological_process 41.56% (64/154) 0.53 0.000507 0.012215
GO:0008324 monoatomic cation transmembrane transporter activity 3.9% (6/154) 2.58 0.000535 0.012342
GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 1.3% (2/154) 5.78 0.000584 0.01295
GO:0061659 ubiquitin-like protein ligase activity 2.6% (4/154) 3.26 0.000834 0.017117
GO:0061630 ubiquitin protein ligase activity 2.6% (4/154) 3.28 0.000807 0.0172
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 1.95% (3/154) 3.93 0.001032 0.02042
GO:0072665 protein localization to vacuole 1.3% (2/154) 5.29 0.00117 0.021614
GO:0072666 establishment of protein localization to vacuole 1.3% (2/154) 5.29 0.00117 0.021614
GO:0005543 phospholipid binding 1.95% (3/154) 3.75 0.00147 0.026268
GO:0015075 monoatomic ion transmembrane transporter activity 3.9% (6/154) 2.29 0.001551 0.026856
GO:0022890 inorganic cation transmembrane transporter activity 3.25% (5/154) 2.49 0.002087 0.034014
GO:0006812 monoatomic cation transport 3.25% (5/154) 2.49 0.002087 0.034014
GO:0003951 NAD+ kinase activity 1.3% (2/154) 4.85 0.002173 0.034399
GO:0046961 proton-transporting ATPase activity, rotational mechanism 1.3% (2/154) 4.45 0.003758 0.034702
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.3% (2/154) 4.45 0.003758 0.034702
GO:0042625 ATPase-coupled ion transmembrane transporter activity 1.3% (2/154) 4.45 0.003758 0.034702
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 1.3% (2/154) 4.4 0.004062 0.03516
GO:0010498 proteasomal protein catabolic process 1.3% (2/154) 4.4 0.004062 0.03516
GO:0070577 lysine-acetylated histone binding 0.65% (1/154) 8.1 0.00365 0.035478
GO:0140030 modification-dependent protein binding 0.65% (1/154) 8.1 0.00365 0.035478
GO:0140033 acetylation-dependent protein binding 0.65% (1/154) 8.1 0.00365 0.035478
GO:0019632 shikimate metabolic process 0.65% (1/154) 8.1 0.00365 0.035478
GO:0016504 peptidase activator activity 0.65% (1/154) 8.1 0.00365 0.035478
GO:0071014 post-mRNA release spliceosomal complex 0.65% (1/154) 8.1 0.00365 0.035478
GO:0005684 U2-type spliceosomal complex 0.65% (1/154) 8.1 0.00365 0.035478
GO:0005673 transcription factor TFIIE complex 0.65% (1/154) 8.1 0.00365 0.035478
GO:2000641 regulation of early endosome to late endosome transport 0.65% (1/154) 8.1 0.00365 0.035478
GO:0008460 dTDP-glucose 4,6-dehydratase activity 0.65% (1/154) 8.1 0.00365 0.035478
GO:0071008 U2-type post-mRNA release spliceosomal complex 0.65% (1/154) 8.1 0.00365 0.035478
GO:0032386 regulation of intracellular transport 0.65% (1/154) 8.1 0.00365 0.035478
GO:0060341 regulation of cellular localization 0.65% (1/154) 8.1 0.00365 0.035478
GO:0032991 protein-containing complex 7.14% (11/154) 1.36 0.003971 0.036065
GO:0042626 ATPase-coupled transmembrane transporter activity 2.6% (4/154) 2.86 0.002345 0.036084
GO:0006811 monoatomic ion transport 3.25% (5/154) 2.26 0.004055 0.036233
GO:0009987 cellular process 25.97% (40/154) 0.63 0.002667 0.039928
GO:0016740 transferase activity 15.58% (24/154) 0.81 0.00475 0.040484
GO:0022804 active transmembrane transporter activity 3.25% (5/154) 2.18 0.005168 0.040904
GO:0016043 cellular component organization 5.19% (8/154) 1.72 0.003254 0.040976
GO:0006996 organelle organization 3.25% (5/154) 2.2 0.004889 0.041037
GO:0022853 active monoatomic ion transmembrane transporter activity 1.95% (3/154) 3.36 0.00319 0.041101
GO:0015399 primary active transmembrane transporter activity 2.6% (4/154) 2.54 0.00512 0.041112
GO:0005488 binding 37.66% (58/154) 0.47 0.002986 0.041361
GO:0043227 membrane-bounded organelle 4.55% (7/154) 1.9 0.002925 0.041544
GO:0043231 intracellular membrane-bounded organelle 4.55% (7/154) 1.9 0.002925 0.041544
GO:0022857 transmembrane transporter activity 6.49% (10/154) 1.39 0.005104 0.041585
GO:0032182 ubiquitin-like protein binding 1.3% (2/154) 4.57 0.003185 0.042008
GO:0043130 ubiquitin binding 1.3% (2/154) 4.57 0.003185 0.042008
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.25% (5/154) 2.19 0.005097 0.042149
GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity 0.65% (1/154) 7.1 0.007287 0.045877
GO:0070548 L-glutamine aminotransferase activity 0.65% (1/154) 7.1 0.007287 0.045877
GO:0000082 G1/S transition of mitotic cell cycle 0.65% (1/154) 7.1 0.007287 0.045877
GO:0044770 cell cycle phase transition 0.65% (1/154) 7.1 0.007287 0.045877
GO:0044772 mitotic cell cycle phase transition 0.65% (1/154) 7.1 0.007287 0.045877
GO:0044843 cell cycle G1/S phase transition 0.65% (1/154) 7.1 0.007287 0.045877
GO:0036440 citrate synthase activity 0.65% (1/154) 7.1 0.007287 0.045877
GO:0006101 citrate metabolic process 0.65% (1/154) 7.1 0.007287 0.045877
GO:0004108 citrate (Si)-synthase activity 0.65% (1/154) 7.1 0.007287 0.045877
GO:0070628 proteasome binding 0.65% (1/154) 7.1 0.007287 0.045877
GO:0006882 intracellular zinc ion homeostasis 0.65% (1/154) 7.1 0.007287 0.045877
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 0.65% (1/154) 7.1 0.007287 0.045877
GO:0060548 obsolete negative regulation of cell death 0.65% (1/154) 7.1 0.007287 0.045877
GO:0005215 transporter activity 6.49% (10/154) 1.36 0.006075 0.046746
GO:0071840 cellular component organization or biogenesis 5.19% (8/154) 1.56 0.006062 0.047303
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.3% (2/154) 4.05 0.00649 0.04925
GO:0044877 protein-containing complex binding 1.95% (3/154) 2.98 0.006635 0.049676
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (154) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms