Coexpression cluster: Cluster_40 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031326 regulation of cellular biosynthetic process 15.07% (11/73) 2.15 3.3e-05 0.00099
GO:0009889 regulation of biosynthetic process 15.07% (11/73) 2.15 3.3e-05 0.00099
GO:0003676 nucleic acid binding 20.55% (15/73) 1.66 6.1e-05 0.001079
GO:0019222 regulation of metabolic process 15.07% (11/73) 2.07 5.7e-05 0.001125
GO:0031323 regulation of cellular metabolic process 15.07% (11/73) 2.09 5.1e-05 0.00113
GO:0060255 regulation of macromolecule metabolic process 15.07% (11/73) 2.09 5.1e-05 0.00113
GO:0010556 regulation of macromolecule biosynthetic process 15.07% (11/73) 2.16 3.3e-05 0.001466
GO:0010468 regulation of gene expression 15.07% (11/73) 2.16 3.2e-05 0.001918
GO:0080090 regulation of primary metabolic process 15.07% (11/73) 2.16 3.2e-05 0.001918
GO:0019219 regulation of nucleobase-containing compound metabolic process 12.33% (9/73) 1.98 0.000442 0.00525
GO:0051252 regulation of RNA metabolic process 12.33% (9/73) 1.99 0.000419 0.005323
GO:2001141 regulation of RNA biosynthetic process 12.33% (9/73) 2.0 0.0004 0.005484
GO:0006355 regulation of DNA-templated transcription 12.33% (9/73) 2.0 0.0004 0.005484
GO:0051171 regulation of nitrogen compound metabolic process 15.07% (11/73) 2.16 3.1e-05 0.005573
GO:0004523 RNA-DNA hybrid ribonuclease activity 4.11% (3/73) 4.46 0.000358 0.005787
GO:0050794 regulation of cellular process 15.07% (11/73) 1.63 0.000786 0.006995
GO:0140098 catalytic activity, acting on RNA 6.85% (5/73) 2.81 0.000747 0.006998
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 4.11% (3/73) 4.12 0.000712 0.007045
GO:0003677 DNA binding 12.33% (9/73) 1.89 0.000703 0.007358
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters 4.11% (3/73) 4.15 0.000672 0.007474
GO:0004521 RNA endonuclease activity 4.11% (3/73) 3.97 0.000964 0.007801
GO:0140640 catalytic activity, acting on a nucleic acid 8.22% (6/73) 2.42 0.000928 0.007867
GO:0050789 regulation of biological process 15.07% (11/73) 1.54 0.001264 0.009782
GO:0030597 RNA glycosylase activity 2.74% (2/73) 5.09 0.001598 0.010161
GO:0030598 rRNA N-glycosylase activity 2.74% (2/73) 5.09 0.001598 0.010161
GO:0004519 endonuclease activity 4.11% (3/73) 3.72 0.001587 0.010863
GO:0097159 organic cyclic compound binding 30.14% (22/73) 0.94 0.001469 0.010898
GO:0065007 biological regulation 15.07% (11/73) 1.51 0.001537 0.010942
GO:0017148 negative regulation of translation 2.74% (2/73) 4.97 0.001891 0.01122
GO:0034249 negative regulation of amide metabolic process 2.74% (2/73) 4.97 0.001891 0.01122
GO:0004540 RNA nuclease activity 4.11% (3/73) 3.53 0.002284 0.013112
GO:0006417 regulation of translation 2.74% (2/73) 4.72 0.002665 0.013953
GO:0034248 regulation of amide metabolic process 2.74% (2/73) 4.72 0.002665 0.013953
GO:0140102 catalytic activity, acting on a rRNA 2.74% (2/73) 4.75 0.002547 0.014167
GO:0010608 post-transcriptional regulation of gene expression 2.74% (2/73) 4.62 0.003035 0.015437
GO:0051248 negative regulation of protein metabolic process 2.74% (2/73) 4.53 0.003428 0.016951
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 2.74% (2/73) 4.39 0.004133 0.019882
GO:0004518 nuclease activity 4.11% (3/73) 2.97 0.006736 0.031553
GO:0000245 spliceosomal complex assembly 1.37% (1/73) 6.85 0.008622 0.039352
GO:0010629 negative regulation of gene expression 2.74% (2/73) 3.65 0.01118 0.04975
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (73) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms