Coexpression cluster: Cluster_209 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003700 DNA-binding transcription factor activity 14.94% (13/87) 2.93 0.0 3e-06
GO:0140110 transcription regulator activity 14.94% (13/87) 2.82 0.0 3e-06
GO:0003677 DNA binding 14.94% (13/87) 2.17 6e-06 0.000375
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.49% (10/87) 1.88 0.000385 0.010168
GO:0009889 regulation of biosynthetic process 11.49% (10/87) 1.76 0.00072 0.010242
GO:0031326 regulation of cellular biosynthetic process 11.49% (10/87) 1.76 0.00072 0.010242
GO:0051252 regulation of RNA metabolic process 11.49% (10/87) 1.89 0.000362 0.011174
GO:0010556 regulation of macromolecule biosynthetic process 11.49% (10/87) 1.77 0.000712 0.011975
GO:0031323 regulation of cellular metabolic process 11.49% (10/87) 1.7 0.001024 0.012634
GO:0060255 regulation of macromolecule metabolic process 11.49% (10/87) 1.7 0.001024 0.012634
GO:0006355 regulation of DNA-templated transcription 11.49% (10/87) 1.9 0.000345 0.012778
GO:2001141 regulation of RNA biosynthetic process 11.49% (10/87) 1.9 0.000345 0.012778
GO:0080090 regulation of primary metabolic process 11.49% (10/87) 1.77 0.000701 0.012962
GO:0010468 regulation of gene expression 11.49% (10/87) 1.77 0.000701 0.012962
GO:0019222 regulation of metabolic process 11.49% (10/87) 1.68 0.001126 0.013022
GO:0003676 nucleic acid binding 16.09% (14/87) 1.31 0.001424 0.015501
GO:0051171 regulation of nitrogen compound metabolic process 11.49% (10/87) 1.77 0.000682 0.015772
GO:0000212 meiotic spindle organization 1.15% (1/87) 8.92 0.002062 0.021194
GO:0070042 rRNA (uridine-N3-)-methyltransferase activity 1.15% (1/87) 7.92 0.00412 0.038111
GO:0016436 rRNA (uridine) methyltransferase activity 1.15% (1/87) 7.92 0.00412 0.038111
GO:0030145 manganese ion binding 2.3% (2/87) 4.22 0.005213 0.045925
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (87) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms