Coexpression cluster: Cluster_111 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009765 photosynthesis, light harvesting 23.91% (11/46) 9.39 0.0 0.0
GO:0009521 photosystem 28.26% (13/46) 7.29 0.0 0.0
GO:0015979 photosynthesis 28.26% (13/46) 7.1 0.0 0.0
GO:0098796 membrane protein complex 30.43% (14/46) 5.48 0.0 0.0
GO:0005575 cellular_component 60.87% (28/46) 2.87 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 23.91% (11/46) 5.79 0.0 0.0
GO:0009523 photosystem II 17.39% (8/46) 7.03 0.0 0.0
GO:0110165 cellular anatomical entity 47.83% (22/46) 2.96 0.0 0.0
GO:0044237 cellular metabolic process 56.52% (26/46) 2.35 0.0 0.0
GO:0009987 cellular process 65.22% (30/46) 1.95 0.0 0.0
GO:0009538 photosystem I reaction center 8.7% (4/46) 9.84 0.0 0.0
GO:0009522 photosystem I 10.87% (5/46) 8.08 0.0 0.0
GO:0016020 membrane 30.43% (14/46) 3.47 0.0 0.0
GO:0032991 protein-containing complex 30.43% (14/46) 3.45 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 10.87% (5/46) 7.46 0.0 0.0
GO:0008152 metabolic process 58.7% (27/46) 1.78 0.0 0.0
GO:0019898 extrinsic component of membrane 8.7% (4/46) 7.45 0.0 0.0
GO:1990204 oxidoreductase complex 10.87% (5/46) 6.19 0.0 0.0
GO:0008150 biological_process 69.57% (32/46) 1.27 0.0 0.0
GO:1902494 catalytic complex 10.87% (5/46) 3.83 2.7e-05 0.000242
GO:0062197 cellular response to chemical stress 4.35% (2/46) 7.38 6.4e-05 0.000517
GO:0034599 cellular response to oxidative stress 4.35% (2/46) 7.38 6.4e-05 0.000517
GO:0070887 cellular response to chemical stimulus 4.35% (2/46) 7.14 9e-05 0.000701
GO:0009579 thylakoid 4.35% (2/46) 6.32 0.00029 0.002163
GO:0005509 calcium ion binding 8.7% (4/46) 3.49 0.000447 0.003203
GO:0010242 oxygen evolving activity 2.17% (1/46) 9.84 0.00109 0.007228
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 2.17% (1/46) 9.84 0.00109 0.007228
GO:0010506 regulation of autophagy 2.17% (1/46) 8.26 0.003268 0.020168
GO:0010206 photosystem II repair 2.17% (1/46) 8.26 0.003268 0.020168
GO:0010207 photosystem II assembly 2.17% (1/46) 7.84 0.004354 0.025143
GO:0046577 long-chain-alcohol oxidase activity 2.17% (1/46) 7.84 0.004354 0.025143
GO:0042549 photosystem II stabilization 2.17% (1/46) 7.52 0.00544 0.03043
GO:0030091 protein repair 2.17% (1/46) 7.26 0.006525 0.031565
GO:0043467 regulation of generation of precursor metabolites and energy 2.17% (1/46) 7.26 0.006525 0.031565
GO:0010109 regulation of photosynthesis 2.17% (1/46) 7.26 0.006525 0.031565
GO:0031329 regulation of cellular catabolic process 2.17% (1/46) 7.26 0.006525 0.031565
GO:0042548 regulation of photosynthesis, light reaction 2.17% (1/46) 7.26 0.006525 0.031565
GO:0016491 oxidoreductase activity 13.04% (6/46) 1.78 0.007477 0.03522
GO:0008079 translation termination factor activity 2.17% (1/46) 6.38 0.01193 0.049662
GO:0015995 chlorophyll biosynthetic process 2.17% (1/46) 6.38 0.01193 0.049662
GO:0003747 translation release factor activity 2.17% (1/46) 6.38 0.01193 0.049662
GO:0006415 translational termination 2.17% (1/46) 6.38 0.01193 0.049662
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (46) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms