Coexpression cluster: Cluster_3458 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004594 pantothenate kinase activity 100.0% (2/2) 13.11 0.0 1e-06
GO:0015937 coenzyme A biosynthetic process 100.0% (2/2) 12.28 0.0 2e-06
GO:0015936 coenzyme A metabolic process 100.0% (2/2) 11.63 0.0 3e-06
GO:0034033 purine nucleoside bisphosphate biosynthetic process 100.0% (2/2) 10.63 0.0 5e-06
GO:0034030 ribonucleoside bisphosphate biosynthetic process 100.0% (2/2) 10.63 0.0 5e-06
GO:0033866 nucleoside bisphosphate biosynthetic process 100.0% (2/2) 10.63 0.0 5e-06
GO:0034032 purine nucleoside bisphosphate metabolic process 100.0% (2/2) 9.61 2e-06 1.5e-05
GO:0033875 ribonucleoside bisphosphate metabolic process 100.0% (2/2) 9.61 2e-06 1.5e-05
GO:0033865 nucleoside bisphosphate metabolic process 100.0% (2/2) 9.61 2e-06 1.5e-05
GO:0009152 purine ribonucleotide biosynthetic process 100.0% (2/2) 9.39 2e-06 1.8e-05
GO:0046390 ribose phosphate biosynthetic process 100.0% (2/2) 8.87 5e-06 2.7e-05
GO:0072522 purine-containing compound biosynthetic process 100.0% (2/2) 8.91 4e-06 2.7e-05
GO:0006164 purine nucleotide biosynthetic process 100.0% (2/2) 9.02 4e-06 2.8e-05
GO:0009260 ribonucleotide biosynthetic process 100.0% (2/2) 8.92 4e-06 2.9e-05
GO:1901293 nucleoside phosphate biosynthetic process 100.0% (2/2) 8.47 8e-06 4.1e-05
GO:0009165 nucleotide biosynthetic process 100.0% (2/2) 8.47 8e-06 4.1e-05
GO:0009150 purine ribonucleotide metabolic process 100.0% (2/2) 8.05 1.4e-05 7e-05
GO:1901137 carbohydrate derivative biosynthetic process 100.0% (2/2) 7.77 2.1e-05 8.7e-05
GO:0009259 ribonucleotide metabolic process 100.0% (2/2) 7.85 1.9e-05 8.7e-05
GO:0019693 ribose phosphate metabolic process 100.0% (2/2) 7.79 2e-05 9e-05
GO:0006163 purine nucleotide metabolic process 100.0% (2/2) 7.67 2.4e-05 9.5e-05
GO:0072521 purine-containing compound metabolic process 100.0% (2/2) 7.58 2.7e-05 0.000103
GO:0006753 nucleoside phosphate metabolic process 100.0% (2/2) 7.41 3.5e-05 0.00012
GO:0009117 nucleotide metabolic process 100.0% (2/2) 7.42 3.4e-05 0.000123
GO:0090407 organophosphate biosynthetic process 100.0% (2/2) 7.36 3.7e-05 0.000123
GO:0055086 nucleobase-containing small molecule metabolic process 100.0% (2/2) 7.19 4.7e-05 0.000149
GO:0034654 nucleobase-containing compound biosynthetic process 100.0% (2/2) 6.87 7.3e-05 0.000225
GO:1901135 carbohydrate derivative metabolic process 100.0% (2/2) 6.84 7.7e-05 0.000227
GO:0018130 heterocycle biosynthetic process 100.0% (2/2) 6.51 0.000121 0.000346
GO:0019637 organophosphate metabolic process 100.0% (2/2) 6.46 0.000129 0.000357
GO:0019438 aromatic compound biosynthetic process 100.0% (2/2) 6.43 0.000134 0.000358
GO:1901566 organonitrogen compound biosynthetic process 100.0% (2/2) 6.33 0.000154 0.0004
GO:1901362 organic cyclic compound biosynthetic process 100.0% (2/2) 6.29 0.000164 0.000413
GO:0005829 cytosol 100.0% (2/2) 6.14 0.000201 0.000491
GO:0044271 cellular nitrogen compound biosynthetic process 100.0% (2/2) 6.04 0.000231 0.000548
GO:0044281 small molecule metabolic process 100.0% (2/2) 5.4 0.000564 0.001301
GO:0044249 cellular biosynthetic process 100.0% (2/2) 5.05 0.000908 0.002036
GO:1901576 organic substance biosynthetic process 100.0% (2/2) 4.93 0.001074 0.002345
GO:0009058 biosynthetic process 100.0% (2/2) 4.86 0.001191 0.002535
GO:0016773 phosphotransferase activity, alcohol group as acceptor 100.0% (2/2) 4.82 0.001248 0.002589
GO:0005634 nucleus 100.0% (2/2) 4.76 0.001367 0.002702
GO:0016301 kinase activity 100.0% (2/2) 4.76 0.001358 0.002749
GO:0016772 transferase activity, transferring phosphorus-containing groups 100.0% (2/2) 4.57 0.001776 0.003429
GO:0006793 phosphorus metabolic process 100.0% (2/2) 4.47 0.002032 0.003748
GO:0006796 phosphate-containing compound metabolic process 100.0% (2/2) 4.48 0.002009 0.003789
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.003983
GO:0005524 ATP binding 100.0% (2/2) 4.34 0.002431 0.004293
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.004382
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.004494
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.00456
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.004575
GO:0035639 purine ribonucleoside triphosphate binding 100.0% (2/2) 4.24 0.002799 0.004647
GO:0032559 adenyl ribonucleotide binding 100.0% (2/2) 3.98 0.004001 0.006265
GO:0030554 adenyl nucleotide binding 100.0% (2/2) 3.93 0.004324 0.006645
GO:0097367 carbohydrate derivative binding 100.0% (2/2) 3.88 0.004612 0.006716
GO:0032553 ribonucleotide binding 100.0% (2/2) 3.89 0.004543 0.006734
GO:0032555 purine ribonucleotide binding 100.0% (2/2) 3.9 0.004469 0.006745
GO:0017076 purine nucleotide binding 100.0% (2/2) 3.85 0.004826 0.006906
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.006908
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.00692
GO:0000166 nucleotide binding 100.0% (2/2) 3.78 0.005284 0.007074
GO:1901265 nucleoside phosphate binding 100.0% (2/2) 3.78 0.005284 0.007074
GO:0043168 anion binding 100.0% (2/2) 3.76 0.005473 0.00721
GO:0036094 small molecule binding 100.0% (2/2) 3.73 0.005654 0.00722
GO:1901363 heterocyclic compound binding 100.0% (2/2) 3.74 0.005579 0.007235
GO:0016740 transferase activity 100.0% (2/2) 3.69 0.006004 0.007551
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.008118
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.008238
GO:1901564 organonitrogen compound metabolic process 100.0% (2/2) 3.59 0.006877 0.008273
GO:0043167 ion binding 100.0% (2/2) 3.28 0.010599 0.012567
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.016074
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.016786
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.02323
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.023434
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.025867
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.028107
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.033665
GO:0003824 catalytic activity 100.0% (2/2) 2.47 0.032758 0.034858
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.035658
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.041467
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms