Coexpression cluster: Cluster_570 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043603 amide metabolic process 100.0% (2/2) 6.58 0.00011 0.000646
GO:0043232 intracellular non-membrane-bounded organelle 100.0% (2/2) 6.59 0.000108 0.000705
GO:0043228 non-membrane-bounded organelle 100.0% (2/2) 6.59 0.000108 0.000705
GO:0005198 structural molecule activity 100.0% (2/2) 6.61 0.000104 0.000878
GO:0043604 amide biosynthetic process 100.0% (2/2) 6.7 9.3e-05 0.000913
GO:0006518 peptide metabolic process 100.0% (2/2) 6.72 8.9e-05 0.001053
GO:0043043 peptide biosynthetic process 100.0% (2/2) 6.79 8.2e-05 0.001206
GO:0009059 macromolecule biosynthetic process 100.0% (2/2) 5.96 0.000258 0.001383
GO:0003735 structural constituent of ribosome 100.0% (2/2) 6.79 8.1e-05 0.0016
GO:1901566 organonitrogen compound biosynthetic process 100.0% (2/2) 5.76 0.000338 0.001661
GO:0044271 cellular nitrogen compound biosynthetic process 100.0% (2/2) 5.65 0.000398 0.001806
GO:0043229 intracellular organelle 100.0% (2/2) 5.47 0.000508 0.001997
GO:0043226 organelle 100.0% (2/2) 5.47 0.000508 0.001997
GO:0006412 translation 100.0% (2/2) 6.83 7.8e-05 0.002287
GO:0044249 cellular biosynthetic process 100.0% (2/2) 4.99 0.000987 0.00364
GO:0005840 ribosome 100.0% (2/2) 6.97 6.4e-05 0.003753
GO:1901576 organic substance biosynthetic process 100.0% (2/2) 4.88 0.001156 0.004013
GO:0009058 biosynthetic process 100.0% (2/2) 4.76 0.001365 0.004473
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.49 0.001978 0.006143
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 50.0% (1/2) 8.75 0.002322 0.006849
GO:0097747 RNA polymerase activity 50.0% (1/2) 8.61 0.002558 0.006861
GO:0034062 5'-3' RNA polymerase activity 50.0% (1/2) 8.61 0.002558 0.006861
GO:0110165 cellular anatomical entity 100.0% (2/2) 4.02 0.003791 0.009724
GO:0006351 DNA-templated transcription 50.0% (1/2) 7.35 0.006106 0.015011
GO:0016779 nucleotidyltransferase activity 50.0% (1/2) 7.29 0.00639 0.015079
GO:0019538 protein metabolic process 100.0% (2/2) 3.57 0.007087 0.015485
GO:0005575 cellular_component 100.0% (2/2) 3.58 0.006955 0.015784
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009176 0.019335
GO:1901564 organonitrogen compound metabolic process 100.0% (2/2) 3.31 0.010227 0.020807
GO:0044237 cellular metabolic process 100.0% (2/2) 3.17 0.012271 0.024134
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.14 0.012797 0.024355
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.92 0.016429 0.029374
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 2.99 0.015934 0.029379
GO:0140098 catalytic activity, acting on RNA 50.0% (1/2) 5.68 0.019389 0.033646
GO:0046983 protein dimerization activity 50.0% (1/2) 5.54 0.021313 0.033985
GO:0018130 heterocycle biosynthetic process 50.0% (1/2) 5.57 0.020891 0.034238
GO:0044238 primary metabolic process 100.0% (2/2) 2.75 0.022204 0.034474
GO:1901362 organic cyclic compound biosynthetic process 50.0% (1/2) 5.44 0.022954 0.034725
GO:0019438 aromatic compound biosynthetic process 50.0% (1/2) 5.58 0.020844 0.035137
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.64 0.025716 0.037932
GO:0009987 cellular process 100.0% (2/2) 2.57 0.028326 0.040762
GO:0008152 metabolic process 100.0% (2/2) 2.55 0.029154 0.040954
GO:0140640 catalytic activity, acting on a nucleic acid 50.0% (1/2) 5.02 0.030577 0.041954
GO:0016070 RNA metabolic process 50.0% (1/2) 4.82 0.035099 0.047065
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms