Coexpression cluster: Cluster_161 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007017 microtubule-based process 8.51% (8/94) 4.94 0.0 0.0
GO:0036211 protein modification process 20.21% (19/94) 1.97 0.0 3.9e-05
GO:0043412 macromolecule modification 20.21% (19/94) 1.87 1e-06 3.9e-05
GO:0035639 purine ribonucleoside triphosphate binding 21.28% (20/94) 1.78 1e-06 4.4e-05
GO:0007010 cytoskeleton organization 5.32% (5/94) 4.88 1e-06 4.6e-05
GO:0015631 tubulin binding 6.38% (6/94) 4.26 1e-06 5.7e-05
GO:0008092 cytoskeletal protein binding 7.45% (7/94) 3.84 1e-06 6.1e-05
GO:0008150 biological_process 52.13% (49/94) 0.85 2e-06 6.5e-05
GO:0005200 structural constituent of cytoskeleton 3.19% (3/94) 6.81 2e-06 6.6e-05
GO:0005488 binding 50.0% (47/94) 0.88 2e-06 7e-05
GO:0000226 microtubule cytoskeleton organization 4.26% (4/94) 5.29 4e-06 9.1e-05
GO:0005515 protein binding 26.6% (25/94) 1.41 4e-06 9.8e-05
GO:0009987 cellular process 36.17% (34/94) 1.1 5e-06 0.000102
GO:0003674 molecular_function 65.96% (62/94) 0.63 5e-06 0.000103
GO:0006468 protein phosphorylation 14.89% (14/94) 2.05 7e-06 0.00013
GO:0016310 phosphorylation 14.89% (14/94) 2.03 8e-06 0.000137
GO:0004672 protein kinase activity 14.89% (14/94) 2.01 9e-06 0.000151
GO:0008017 microtubule binding 5.32% (5/94) 4.12 1.1e-05 0.000173
GO:0032555 purine ribonucleotide binding 21.28% (20/94) 1.54 1.3e-05 0.000195
GO:0032553 ribonucleotide binding 21.28% (20/94) 1.52 1.5e-05 0.000214
GO:0097367 carbohydrate derivative binding 21.28% (20/94) 1.51 1.7e-05 0.000229
GO:0016740 transferase activity 23.4% (22/94) 1.4 2e-05 0.000254
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.89% (14/94) 1.9 2.1e-05 0.000265
GO:0017076 purine nucleotide binding 21.28% (20/94) 1.47 2.5e-05 0.000292
GO:0016301 kinase activity 14.89% (14/94) 1.85 3.1e-05 0.000353
GO:0006796 phosphate-containing compound metabolic process 15.96% (15/94) 1.74 3.8e-05 0.000365
GO:0006793 phosphorus metabolic process 15.96% (15/94) 1.74 4e-05 0.000365
GO:0005874 microtubule 3.19% (3/94) 5.54 3.8e-05 0.000369
GO:0099513 polymeric cytoskeletal fiber 3.19% (3/94) 5.54 3.8e-05 0.000369
GO:0099081 supramolecular polymer 3.19% (3/94) 5.54 3.8e-05 0.000369
GO:0099512 supramolecular fiber 3.19% (3/94) 5.54 3.8e-05 0.000369
GO:0000166 nucleotide binding 21.28% (20/94) 1.4 4.8e-05 0.000419
GO:1901265 nucleoside phosphate binding 21.28% (20/94) 1.4 4.8e-05 0.000419
GO:0099080 supramolecular complex 3.19% (3/94) 5.35 5.6e-05 0.000467
GO:0043168 anion binding 21.28% (20/94) 1.39 5.8e-05 0.000469
GO:1901363 heterocyclic compound binding 21.28% (20/94) 1.35 8.3e-05 0.00064
GO:0005524 ATP binding 17.02% (16/94) 1.57 8.2e-05 0.000653
GO:0036094 small molecule binding 21.28% (20/94) 1.34 9.2e-05 0.000669
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.89% (14/94) 1.71 9e-05 0.000672
GO:0019538 protein metabolic process 20.21% (19/94) 1.26 0.000276 0.001969
GO:0006996 organelle organization 5.32% (5/94) 2.91 0.000559 0.003884
GO:0003924 GTPase activity 4.26% (4/94) 3.38 0.000625 0.004141
GO:0032559 adenyl ribonucleotide binding 17.02% (16/94) 1.31 0.000616 0.004178
GO:0007264 small GTPase mediated signal transduction 2.13% (2/94) 5.49 0.000909 0.005889
GO:1901564 organonitrogen compound metabolic process 21.28% (20/94) 1.07 0.001015 0.006153
GO:0140096 catalytic activity, acting on a protein 17.02% (16/94) 1.25 0.00101 0.006259
GO:0030554 adenyl nucleotide binding 17.02% (16/94) 1.25 0.001 0.006331
GO:0032561 guanyl ribonucleotide binding 4.26% (4/94) 3.11 0.001238 0.006917
GO:0005525 GTP binding 4.26% (4/94) 3.11 0.001238 0.006917
GO:0003824 catalytic activity 36.17% (34/94) 0.72 0.001218 0.007082
GO:0043167 ion binding 24.47% (23/94) 0.96 0.001201 0.007132
GO:0019001 guanyl nucleotide binding 4.26% (4/94) 3.07 0.001374 0.007531
GO:0005085 guanyl-nucleotide exchange factor activity 2.13% (2/94) 5.17 0.001425 0.007663
GO:0048527 lateral root development 1.06% (1/94) 8.81 0.002228 0.010079
GO:0048528 post-embryonic root development 1.06% (1/94) 8.81 0.002228 0.010079
GO:0140496 gamma-tubulin complex binding 1.06% (1/94) 8.81 0.002228 0.010079
GO:0031113 regulation of microtubule polymerization 1.06% (1/94) 8.81 0.002228 0.010079
GO:0090696 post-embryonic plant organ development 1.06% (1/94) 8.81 0.002228 0.010079
GO:0010968 regulation of microtubule nucleation 1.06% (1/94) 8.81 0.002228 0.010079
GO:0031110 regulation of microtubule polymerization or depolymerization 1.06% (1/94) 8.81 0.002228 0.010079
GO:0045488 pectin metabolic process 1.06% (1/94) 8.81 0.002228 0.010079
GO:0010393 galacturonan metabolic process 1.06% (1/94) 8.81 0.002228 0.010079
GO:0016409 palmitoyltransferase activity 2.13% (2/94) 4.86 0.00219 0.011557
GO:0043170 macromolecule metabolic process 21.28% (20/94) 0.91 0.003847 0.01713
GO:0044238 primary metabolic process 25.53% (24/94) 0.78 0.00489 0.021442
GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity 1.06% (1/94) 7.23 0.006669 0.02837
GO:0000278 mitotic cell cycle 1.06% (1/94) 7.23 0.006669 0.02837
GO:0004714 transmembrane receptor protein tyrosine kinase activity 2.13% (2/94) 3.88 0.008252 0.034587
GO:0030695 GTPase regulator activity 2.13% (2/94) 3.86 0.008515 0.034668
GO:0060589 nucleoside-triphosphatase regulator activity 2.13% (2/94) 3.86 0.008515 0.034668
GO:0019199 transmembrane receptor protein kinase activity 2.13% (2/94) 3.79 0.009326 0.037434
GO:0004888 transmembrane signaling receptor activity 2.13% (2/94) 3.72 0.010169 0.040254
GO:0008373 sialyltransferase activity 1.06% (1/94) 6.49 0.011091 0.041592
GO:0048640 negative regulation of developmental growth 1.06% (1/94) 6.49 0.011091 0.041592
GO:0046621 negative regulation of organ growth 1.06% (1/94) 6.49 0.011091 0.041592
GO:0045926 negative regulation of growth 1.06% (1/94) 6.49 0.011091 0.041592
GO:0071704 organic substance metabolic process 25.53% (24/94) 0.67 0.012047 0.04459
GO:0005815 microtubule organizing center 1.06% (1/94) 6.23 0.013295 0.045108
GO:0000922 spindle pole 1.06% (1/94) 6.23 0.013295 0.045108
GO:0043015 gamma-tubulin binding 1.06% (1/94) 6.23 0.013295 0.045108
GO:0043622 cortical microtubule organization 1.06% (1/94) 6.23 0.013295 0.045108
GO:0030865 cortical cytoskeleton organization 1.06% (1/94) 6.23 0.013295 0.045108
GO:0006807 nitrogen compound metabolic process 21.28% (20/94) 0.75 0.012668 0.046288
GO:0004713 protein tyrosine kinase activity 2.13% (2/94) 3.54 0.012894 0.046518
GO:0038023 signaling receptor activity 2.13% (2/94) 3.45 0.01453 0.048719
GO:0051241 negative regulation of multicellular organismal process 1.06% (1/94) 6.0 0.015494 0.049063
GO:0015936 coenzyme A metabolic process 1.06% (1/94) 6.0 0.015494 0.049063
GO:0051093 negative regulation of developmental process 1.06% (1/94) 6.0 0.015494 0.049063
GO:0031122 cytoplasmic microtubule organization 1.06% (1/94) 6.0 0.015494 0.049063
GO:0007020 microtubule nucleation 1.06% (1/94) 6.0 0.015494 0.049063
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (94) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms