Coexpression cluster: Cluster_608 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901362 organic cyclic compound biosynthetic process 33.33% (2/6) 4.85 0.001934 0.010869
GO:0030880 RNA polymerase complex 16.67% (1/6) 9.08 0.001848 0.0109
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 16.67% (1/6) 9.08 0.001848 0.0109
GO:0005741 mitochondrial outer membrane 16.67% (1/6) 9.08 0.001848 0.0109
GO:0019438 aromatic compound biosynthetic process 33.33% (2/6) 4.99 0.001598 0.011089
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 16.67% (1/6) 9.46 0.001421 0.011182
GO:0004664 prephenate dehydratase activity 16.67% (1/6) 9.46 0.001421 0.011182
GO:0009094 L-phenylalanine biosynthetic process 16.67% (1/6) 9.46 0.001421 0.011182
GO:0000428 DNA-directed RNA polymerase complex 16.67% (1/6) 9.32 0.001563 0.011531
GO:0055029 nuclear DNA-directed RNA polymerase complex 16.67% (1/6) 9.97 0.000995 0.011743
GO:0098656 monoatomic anion transmembrane transport 16.67% (1/6) 9.78 0.001137 0.0122
GO:1901360 organic cyclic compound metabolic process 50.0% (3/6) 3.74 0.000959 0.01258
GO:0004536 DNA nuclease activity 16.67% (1/6) 9.61 0.001279 0.01258
GO:0006725 cellular aromatic compound metabolic process 50.0% (3/6) 3.77 0.000907 0.013382
GO:0008409 5'-3' exonuclease activity 16.67% (1/6) 10.19 0.000853 0.01438
GO:0006383 transcription by RNA polymerase III 16.67% (1/6) 10.19 0.000853 0.01438
GO:0006558 L-phenylalanine metabolic process 16.67% (1/6) 8.46 0.002841 0.014576
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 16.67% (1/6) 8.46 0.002841 0.014576
GO:0006820 monoatomic anion transport 16.67% (1/6) 8.26 0.003267 0.016061
GO:0016895 DNA exonuclease activity, producing 5'-phosphomonoesters 16.67% (1/6) 10.46 0.000711 0.016778
GO:0004529 DNA exonuclease activity 16.67% (1/6) 10.46 0.000711 0.016778
GO:0005666 RNA polymerase III complex 16.67% (1/6) 10.46 0.000711 0.016778
GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity 16.67% (1/6) 12.78 0.000142 0.016782
GO:0009073 aromatic amino acid family biosynthetic process 16.67% (1/6) 7.74 0.004684 0.018425
GO:0008509 monoatomic anion transmembrane transporter activity 16.67% (1/6) 7.74 0.004684 0.018425
GO:0005253 monoatomic anion channel activity 16.67% (1/6) 7.87 0.004259 0.018614
GO:0008308 voltage-gated monoatomic anion channel activity 16.67% (1/6) 7.87 0.004259 0.018614
GO:0061695 transferase complex, transferring phosphorus-containing groups 16.67% (1/6) 7.65 0.004968 0.018909
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 16.67% (1/6) 7.78 0.004543 0.019144
GO:0031968 organelle outer membrane 16.67% (1/6) 7.92 0.004117 0.019434
GO:0019867 outer membrane 16.67% (1/6) 7.53 0.005392 0.019884
GO:0031966 mitochondrial membrane 16.67% (1/6) 7.46 0.005676 0.020294
GO:0098588 bounding membrane of organelle 16.67% (1/6) 7.32 0.006242 0.021662
GO:0004527 exonuclease activity 16.67% (1/6) 7.11 0.007232 0.023063
GO:0005244 voltage-gated monoatomic ion channel activity 16.67% (1/6) 7.14 0.00709 0.02324
GO:0022832 voltage-gated channel activity 16.67% (1/6) 7.14 0.00709 0.02324
GO:0035312 5'-3' DNA exonuclease activity 16.67% (1/6) 11.19 0.000427 0.02517
GO:0016836 hydro-lyase activity 16.67% (1/6) 6.9 0.008362 0.025966
GO:0009072 aromatic amino acid metabolic process 16.67% (1/6) 6.83 0.008786 0.026582
GO:0009987 cellular process 66.67% (4/6) 1.99 0.009019 0.026606
GO:0090304 nucleic acid metabolic process 33.33% (2/6) 3.69 0.009335 0.026867
GO:0022836 gated channel activity 16.67% (1/6) 6.42 0.011606 0.032607
GO:0044249 cellular biosynthetic process 33.33% (2/6) 3.41 0.013611 0.03735
GO:0006139 nucleobase-containing compound metabolic process 33.33% (2/6) 3.35 0.014712 0.038577
GO:0003677 DNA binding 33.33% (2/6) 3.32 0.015204 0.039002
GO:0031090 organelle membrane 16.67% (1/6) 6.09 0.01456 0.039048
GO:1901576 organic substance biosynthetic process 33.33% (2/6) 3.29 0.01583 0.039744
GO:0009058 biosynthetic process 33.33% (2/6) 3.17 0.018537 0.039771
GO:0006351 DNA-templated transcription 16.67% (1/6) 5.77 0.018207 0.039787
GO:0034220 monoatomic ion transmembrane transport 16.67% (1/6) 5.77 0.018207 0.039787
GO:0016835 carbon-oxygen lyase activity 16.67% (1/6) 5.77 0.018207 0.039787
GO:1901607 alpha-amino acid biosynthetic process 16.67% (1/6) 5.93 0.016245 0.039935
GO:1990234 transferase complex 16.67% (1/6) 5.68 0.019327 0.040726
GO:0005216 monoatomic ion channel activity 16.67% (1/6) 5.83 0.017507 0.041316
GO:0008652 amino acid biosynthetic process 16.67% (1/6) 5.79 0.017927 0.041479
GO:0046483 heterocycle metabolic process 33.33% (2/6) 3.22 0.017379 0.041851
GO:0044237 cellular metabolic process 50.0% (3/6) 2.17 0.02099 0.043453
GO:1901605 alpha-amino acid metabolic process 16.67% (1/6) 5.44 0.022821 0.046428
GO:0015267 channel activity 16.67% (1/6) 5.33 0.024633 0.04765
GO:0022803 passive transmembrane transporter activity 16.67% (1/6) 5.33 0.024633 0.04765
GO:0140535 intracellular protein-containing complex 16.67% (1/6) 5.34 0.024354 0.048708
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (6) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms