Coexpression cluster: Cluster_221 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 43.64% (48/110) 0.99 0.0 9.2e-05
GO:0071704 organic substance metabolic process 35.45% (39/110) 1.14 1e-06 9.7e-05
GO:0044238 primary metabolic process 34.55% (38/110) 1.21 0.0 0.00013
GO:0008152 metabolic process 35.45% (39/110) 1.05 3e-06 0.000364
GO:0009987 cellular process 34.55% (38/110) 1.04 5e-06 0.000556
GO:0044237 cellular metabolic process 26.36% (29/110) 1.25 6e-06 0.000584
GO:0003674 molecular_function 63.64% (70/110) 0.57 8e-06 0.000617
GO:0006807 nitrogen compound metabolic process 28.18% (31/110) 1.16 1e-05 0.000702
GO:0044281 small molecule metabolic process 10.0% (11/110) 2.33 1.3e-05 0.000768
GO:0008150 biological_process 48.18% (53/110) 0.74 1.4e-05 0.000787
GO:0035639 purine ribonucleoside triphosphate binding 17.27% (19/110) 1.48 4.6e-05 0.002074
GO:0044249 cellular biosynthetic process 11.82% (13/110) 1.91 4.3e-05 0.002142
GO:0000166 nucleotide binding 20.0% (22/110) 1.32 5.7e-05 0.002193
GO:1901265 nucleoside phosphate binding 20.0% (22/110) 1.32 5.7e-05 0.002193
GO:1901564 organonitrogen compound metabolic process 22.73% (25/110) 1.17 8.5e-05 0.002886
GO:1901363 heterocyclic compound binding 20.0% (22/110) 1.26 0.0001 0.003018
GO:0044283 small molecule biosynthetic process 5.45% (6/110) 3.0 0.000111 0.003025
GO:0017076 purine nucleotide binding 19.09% (21/110) 1.32 8.5e-05 0.00306
GO:1901576 organic substance biosynthetic process 11.82% (13/110) 1.8 9.6e-05 0.003072
GO:0036094 small molecule binding 20.0% (22/110) 1.25 0.000111 0.003169
GO:0032787 monocarboxylic acid metabolic process 4.55% (5/110) 3.37 0.000133 0.003434
GO:0018130 heterocycle biosynthetic process 6.36% (7/110) 2.6 0.000169 0.004163
GO:0009058 biosynthetic process 11.82% (13/110) 1.68 0.000217 0.005121
GO:1901362 organic cyclic compound biosynthetic process 6.36% (7/110) 2.46 0.000299 0.006774
GO:0016783 sulfurtransferase activity 1.82% (2/110) 6.12 0.000365 0.007338
GO:0046394 carboxylic acid biosynthetic process 4.55% (5/110) 3.06 0.000354 0.007402
GO:0016053 organic acid biosynthetic process 4.55% (5/110) 3.06 0.000354 0.007402
GO:0006082 organic acid metabolic process 6.36% (7/110) 2.36 0.000453 0.007457
GO:0097367 carbohydrate derivative binding 17.27% (19/110) 1.21 0.000488 0.007572
GO:0032555 purine ribonucleotide binding 17.27% (19/110) 1.24 0.000391 0.007585
GO:0043436 oxoacid metabolic process 6.36% (7/110) 2.37 0.000448 0.007603
GO:0043170 macromolecule metabolic process 22.73% (25/110) 1.01 0.000485 0.007739
GO:0043168 anion binding 18.18% (20/110) 1.16 0.000532 0.007813
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.82% (13/110) 1.57 0.000448 0.007842
GO:0005524 ATP binding 14.55% (16/110) 1.35 0.000529 0.007985
GO:0032553 ribonucleotide binding 17.27% (19/110) 1.22 0.000442 0.008009
GO:0019752 carboxylic acid metabolic process 6.36% (7/110) 2.37 0.000433 0.008106
GO:1901137 carbohydrate derivative biosynthetic process 3.64% (4/110) 3.4 0.000583 0.008112
GO:0046483 heterocycle metabolic process 10.91% (12/110) 1.61 0.000578 0.008254
GO:0005488 binding 41.82% (46/110) 0.62 0.000656 0.008909
GO:0055086 nucleobase-containing small molecule metabolic process 4.55% (5/110) 2.84 0.000697 0.009228
GO:0140096 catalytic activity, acting on a protein 16.36% (18/110) 1.19 0.000818 0.009869
GO:0006796 phosphate-containing compound metabolic process 12.73% (14/110) 1.41 0.000767 0.009914
GO:0006793 phosphorus metabolic process 12.73% (14/110) 1.41 0.000789 0.009966
GO:0030554 adenyl nucleotide binding 16.36% (18/110) 1.19 0.000809 0.009978
GO:1901360 organic cyclic compound metabolic process 10.91% (12/110) 1.54 0.000862 0.010179
GO:0072330 monocarboxylic acid biosynthetic process 2.73% (3/110) 4.0 0.000902 0.010425
GO:1901135 carbohydrate derivative metabolic process 4.55% (5/110) 2.75 0.000947 0.010717
GO:0019438 aromatic compound biosynthetic process 5.45% (6/110) 2.38 0.001095 0.012129
GO:0034641 cellular nitrogen compound metabolic process 11.82% (13/110) 1.41 0.001227 0.013329
GO:0097159 organic cyclic compound binding 27.27% (30/110) 0.79 0.001409 0.014997
GO:0016787 hydrolase activity 15.45% (17/110) 1.15 0.001531 0.01569
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.82% (13/110) 1.38 0.001509 0.015762
GO:0044271 cellular nitrogen compound biosynthetic process 7.27% (8/110) 1.87 0.00167 0.016795
GO:0016301 kinase activity 10.91% (12/110) 1.4 0.00197 0.019447
GO:0072521 purine-containing compound metabolic process 3.64% (4/110) 2.91 0.002055 0.019923
GO:0034654 nucleobase-containing compound biosynthetic process 4.55% (5/110) 2.46 0.00224 0.021335
GO:0016174 NAD(P)H oxidase H2O2-forming activity 0.91% (1/110) 8.58 0.002607 0.021451
GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity 0.91% (1/110) 8.58 0.002607 0.021451
GO:0030620 U2 snRNA binding 0.91% (1/110) 8.58 0.002607 0.021451
GO:0004076 biotin synthase activity 0.91% (1/110) 8.58 0.002607 0.021451
GO:0044773 mitotic DNA damage checkpoint signaling 0.91% (1/110) 8.58 0.002607 0.021451
GO:0007095 mitotic G2 DNA damage checkpoint signaling 0.91% (1/110) 8.58 0.002607 0.021451
GO:0009341 beta-galactosidase complex 0.91% (1/110) 8.58 0.002607 0.021451
GO:0005975 carbohydrate metabolic process 6.36% (7/110) 1.95 0.002354 0.022042
GO:0072522 purine-containing compound biosynthetic process 2.73% (3/110) 3.44 0.002738 0.022186
GO:0006725 cellular aromatic compound metabolic process 10.0% (11/110) 1.45 0.002418 0.022251
GO:0032559 adenyl ribonucleotide binding 14.55% (16/110) 1.09 0.003341 0.026291
GO:0006139 nucleobase-containing compound metabolic process 9.09% (10/110) 1.47 0.003331 0.026599
GO:0016740 transferase activity 17.27% (19/110) 0.96 0.003642 0.02825
GO:1902749 regulation of cell cycle G2/M phase transition 0.91% (1/110) 7.58 0.005208 0.031421
GO:0006768 biotin metabolic process 0.91% (1/110) 7.58 0.005208 0.031421
GO:0009102 biotin biosynthetic process 0.91% (1/110) 7.58 0.005208 0.031421
GO:0004055 argininosuccinate synthase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:1902750 negative regulation of cell cycle G2/M phase transition 0.91% (1/110) 7.58 0.005208 0.031421
GO:0015925 galactosidase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:0004049 anthranilate synthase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:0044818 mitotic G2/M transition checkpoint 0.91% (1/110) 7.58 0.005208 0.031421
GO:0044774 mitotic DNA integrity checkpoint signaling 0.91% (1/110) 7.58 0.005208 0.031421
GO:0004565 beta-galactosidase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle 0.91% (1/110) 7.58 0.005208 0.031421
GO:0010389 regulation of G2/M transition of mitotic cell cycle 0.91% (1/110) 7.58 0.005208 0.031421
GO:0004001 adenosine kinase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:0016882 cyclo-ligase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:0004792 thiosulfate sulfurtransferase activity 0.91% (1/110) 7.58 0.005208 0.031421
GO:1901566 organonitrogen compound biosynthetic process 6.36% (7/110) 1.79 0.004307 0.032942
GO:0019867 outer membrane 1.82% (2/110) 4.34 0.004454 0.033592
GO:0043167 ion binding 21.82% (24/110) 0.79 0.00482 0.034898
GO:0019538 protein metabolic process 16.36% (18/110) 0.96 0.004763 0.03495
GO:0008017 microtubule binding 2.73% (3/110) 3.16 0.00475 0.035329
GO:0015631 tubulin binding 2.73% (3/110) 3.03 0.006076 0.036257
GO:0051274 beta-glucan biosynthetic process 1.82% (2/110) 4.06 0.006469 0.037773
GO:0006468 protein phosphorylation 9.09% (10/110) 1.34 0.006436 0.037988
GO:0034404 nucleobase-containing small molecule biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0019206 nucleoside kinase activity 0.91% (1/110) 7.0 0.007802 0.038512
GO:0009163 nucleoside biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0005094 Rho GDP-dissociation inhibitor activity 0.91% (1/110) 7.0 0.007802 0.038512
GO:0006166 purine ribonucleoside salvage 0.91% (1/110) 7.0 0.007802 0.038512
GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity 0.91% (1/110) 7.0 0.007802 0.038512
GO:0042278 purine nucleoside metabolic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0042451 purine nucleoside biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0046128 purine ribonucleoside metabolic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0042455 ribonucleoside biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:1901659 glycosyl compound biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0046129 purine ribonucleoside biosynthetic process 0.91% (1/110) 7.0 0.007802 0.038512
GO:0043174 nucleoside salvage 0.91% (1/110) 7.0 0.007802 0.038512
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.82% (2/110) 4.03 0.006746 0.038556
GO:0051273 beta-glucan metabolic process 1.82% (2/110) 4.03 0.006746 0.038556
GO:0016782 transferase activity, transferring sulphur-containing groups 1.82% (2/110) 3.91 0.007902 0.038658
GO:0016310 phosphorylation 9.09% (10/110) 1.32 0.006908 0.039073
GO:0009150 purine ribonucleotide metabolic process 2.73% (3/110) 2.85 0.00859 0.041647
GO:0004672 protein kinase activity 9.09% (10/110) 1.3 0.007567 0.042361
GO:0019725 cellular homeostasis 1.82% (2/110) 3.8 0.009142 0.04393
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.82% (2/110) 3.78 0.009465 0.045081
GO:0030870 Mre11 complex 0.91% (1/110) 6.58 0.010389 0.045493
GO:0000427 plastid-encoded plastid RNA polymerase complex 0.91% (1/110) 6.58 0.010389 0.045493
GO:0042770 signal transduction in response to DNA damage 0.91% (1/110) 6.58 0.010389 0.045493
GO:0000077 DNA damage checkpoint signaling 0.91% (1/110) 6.58 0.010389 0.045493
GO:0004148 dihydrolipoyl dehydrogenase activity 0.91% (1/110) 6.58 0.010389 0.045493
GO:0017069 snRNA binding 0.91% (1/110) 6.58 0.010389 0.045493
GO:0140535 intracellular protein-containing complex 2.73% (3/110) 2.73 0.010613 0.045738
GO:0003924 GTPase activity 2.73% (3/110) 2.73 0.010613 0.045738
GO:0009259 ribonucleotide metabolic process 2.73% (3/110) 2.78 0.009805 0.045899
GO:0009250 glucan biosynthetic process 1.82% (2/110) 3.75 0.009792 0.046236
GO:1902494 catalytic complex 3.64% (4/110) 2.25 0.01032 0.04749
GO:0036211 protein modification process 10.91% (12/110) 1.08 0.011161 0.047718
GO:0019693 ribose phosphate metabolic process 2.73% (3/110) 2.75 0.010286 0.047736
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (110) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms