Coexpression cluster: Cluster_402 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0110165 cellular anatomical entity 100.0% (3/3) 4.02 0.000233 0.003732
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 33.33% (1/3) 12.78 0.000142 0.003792
GO:0030688 preribosome, small subunit precursor 33.33% (1/3) 12.78 0.000142 0.003792
GO:0030490 maturation of SSU-rRNA 33.33% (1/3) 12.19 0.000213 0.004266
GO:0001216 DNA-binding transcription activator activity 33.33% (1/3) 10.32 0.000782 0.004812
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific 33.33% (1/3) 10.32 0.000782 0.004812
GO:0005102 signaling receptor binding 33.33% (1/3) 10.19 0.000853 0.004875
GO:0005730 nucleolus 33.33% (1/3) 10.08 0.000924 0.004929
GO:0030545 signaling receptor regulator activity 33.33% (1/3) 10.46 0.000711 0.00517
GO:0008083 growth factor activity 33.33% (1/3) 10.46 0.000711 0.00517
GO:0048018 receptor ligand activity 33.33% (1/3) 10.46 0.000711 0.00517
GO:0030546 signaling receptor activator activity 33.33% (1/3) 10.46 0.000711 0.00517
GO:0008283 cell population proliferation 33.33% (1/3) 11.19 0.000427 0.005688
GO:0030686 90S preribosome 33.33% (1/3) 13.78 7.1e-05 0.005689
GO:0016602 CCAAT-binding factor complex 33.33% (1/3) 9.69 0.001208 0.006042
GO:0043229 intracellular organelle 66.67% (2/3) 4.89 0.0015 0.006316
GO:0043226 organelle 66.67% (2/3) 4.89 0.0015 0.006316
GO:0005575 cellular_component 100.0% (3/3) 3.58 0.00058 0.006627
GO:0030684 preribosome 33.33% (1/3) 9.39 0.001493 0.007024
GO:0032991 protein-containing complex 66.67% (2/3) 4.58 0.00227 0.009082
GO:0090575 RNA polymerase II transcription regulator complex 33.33% (1/3) 8.32 0.003126 0.011907
GO:0140677 molecular function activator activity 33.33% (1/3) 7.95 0.004048 0.014719
GO:0005667 transcription regulator complex 33.33% (1/3) 7.83 0.004402 0.015313
GO:0006364 rRNA processing 33.33% (1/3) 7.76 0.004615 0.015383
GO:0016072 rRNA metabolic process 33.33% (1/3) 7.63 0.00504 0.015509
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 33.33% (1/3) 7.67 0.004899 0.015675
GO:0046982 protein heterodimerization activity 33.33% (1/3) 7.19 0.006811 0.020181
GO:0034470 ncRNA processing 33.33% (1/3) 6.69 0.00964 0.027542
GO:1990904 ribonucleoprotein complex 33.33% (1/3) 6.19 0.013591 0.036243
GO:0005576 extracellular region 33.33% (1/3) 6.23 0.013239 0.036521
GO:0034660 ncRNA metabolic process 33.33% (1/3) 6.1 0.014507 0.037437
GO:0140513 nuclear protein-containing complex 33.33% (1/3) 5.86 0.01711 0.042775
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms