Coexpression cluster: Cluster_10 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0055085 transmembrane transport 10.56% (17/161) 2.39 0.0 1.5e-05
GO:0005215 transporter activity 9.32% (15/161) 1.88 1.6e-05 0.00084
GO:0051179 localization 11.18% (18/161) 1.68 1.5e-05 0.000847
GO:0003674 molecular_function 60.25% (97/161) 0.5 6e-06 0.000866
GO:0015297 antiporter activity 3.11% (5/161) 4.05 1.4e-05 0.000899
GO:0051234 establishment of localization 11.18% (18/161) 1.7 1.2e-05 0.000959
GO:0022857 transmembrane transporter activity 9.32% (15/161) 1.92 1.2e-05 0.001122
GO:0006810 transport 11.18% (18/161) 1.72 1e-05 0.001207
GO:0015291 secondary active transmembrane transporter activity 3.73% (6/161) 3.79 5e-06 0.00123
GO:0009987 cellular process 29.81% (48/161) 0.82 3.1e-05 0.001443
GO:0016020 membrane 9.32% (15/161) 1.76 4.2e-05 0.001751
GO:0072525 pyridine-containing compound biosynthetic process 1.86% (3/161) 5.1 9.1e-05 0.003508
GO:0008150 biological_process 42.86% (69/161) 0.57 0.000105 0.003736
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 2.48% (4/161) 3.95 0.000138 0.00453
GO:0022804 active transmembrane transporter activity 4.35% (7/161) 2.6 0.000171 0.005261
GO:0003824 catalytic activity 34.16% (55/161) 0.63 0.000266 0.007663
GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity 1.24% (2/161) 6.03 0.000399 0.010825
GO:0006839 mitochondrial transport 1.86% (3/161) 4.33 0.000451 0.011541
GO:0019359 nicotinamide nucleotide biosynthetic process 1.24% (2/161) 5.71 0.000638 0.015488
GO:0019363 pyridine nucleotide biosynthetic process 1.24% (2/161) 5.57 0.000778 0.017938
GO:0019637 organophosphate metabolic process 4.35% (7/161) 2.19 0.000954 0.020945
GO:0140103 catalytic activity, acting on a glycoprotein 1.24% (2/161) 5.33 0.001098 0.023011
GO:0051213 dioxygenase activity 1.86% (3/161) 3.81 0.001303 0.024036
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 1.86% (3/161) 3.81 0.001303 0.024036
GO:0042910 xenobiotic transmembrane transporter activity 1.86% (3/161) 3.84 0.001237 0.024796
GO:0044281 small molecule metabolic process 6.21% (10/161) 1.64 0.001496 0.025538
GO:0019674 NAD metabolic process 1.24% (2/161) 5.13 0.001471 0.026079
GO:0009072 aromatic amino acid metabolic process 1.86% (3/161) 3.66 0.001749 0.028795
GO:0006793 phosphorus metabolic process 10.56% (17/161) 1.14 0.001931 0.029666
GO:0006796 phosphate-containing compound metabolic process 10.56% (17/161) 1.14 0.001871 0.029749
GO:0006816 calcium ion transport 1.24% (2/161) 4.86 0.002127 0.031633
GO:0006558 L-phenylalanine metabolic process 1.24% (2/161) 4.71 0.002628 0.036718
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 1.24% (2/161) 4.71 0.002628 0.036718
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 0.62% (1/161) 8.03 0.003816 0.047547
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 0.62% (1/161) 8.03 0.003816 0.047547
GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity 0.62% (1/161) 8.03 0.003816 0.047547
GO:0004411 homogentisate 1,2-dioxygenase activity 0.62% (1/161) 8.03 0.003816 0.047547
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (161) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms