Coexpression cluster: Cluster_482 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019005 SCF ubiquitin ligase complex 25.0% (1/4) 11.36 0.000379 0.011187
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 25.0% (1/4) 11.36 0.000379 0.011187
GO:0006073 obsolete cellular glucan metabolic process 25.0% (1/4) 8.51 0.002747 0.016206
GO:0016762 xyloglucan:xyloglucosyl transferase activity 25.0% (1/4) 8.51 0.002747 0.016206
GO:0005618 cell wall 25.0% (1/4) 8.51 0.002747 0.016206
GO:0030312 external encapsulating structure 25.0% (1/4) 8.32 0.003125 0.016762
GO:0042546 cell wall biogenesis 25.0% (1/4) 7.72 0.004732 0.018614
GO:0010410 hemicellulose metabolic process 25.0% (1/4) 7.81 0.004449 0.018749
GO:0010383 cell wall polysaccharide metabolic process 25.0% (1/4) 7.81 0.004449 0.018749
GO:0030163 protein catabolic process 25.0% (1/4) 7.97 0.003976 0.01955
GO:0048046 apoplast 25.0% (1/4) 7.53 0.005393 0.019888
GO:0044036 cell wall macromolecule metabolic process 25.0% (1/4) 7.39 0.00596 0.020685
GO:0010411 xyloglucan metabolic process 25.0% (1/4) 8.56 0.002652 0.022354
GO:0044085 cellular component biogenesis 25.0% (1/4) 7.12 0.007186 0.023556
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 25.0% (1/4) 8.66 0.002463 0.024219
GO:0010498 proteasomal protein catabolic process 25.0% (1/4) 8.66 0.002463 0.024219
GO:0000151 ubiquitin ligase complex 25.0% (1/4) 9.19 0.001706 0.025157
GO:0044042 glucan metabolic process 25.0% (1/4) 6.91 0.008318 0.025828
GO:0046527 glucosyltransferase activity 25.0% (1/4) 6.74 0.009354 0.027593
GO:0031461 cullin-RING ubiquitin ligase complex 25.0% (1/4) 9.36 0.001516 0.029818
GO:0019941 modification-dependent protein catabolic process 25.0% (1/4) 6.09 0.014616 0.031938
GO:1901565 organonitrogen compound catabolic process 25.0% (1/4) 6.09 0.014616 0.031938
GO:0006511 ubiquitin-dependent protein catabolic process 25.0% (1/4) 6.09 0.014616 0.031938
GO:0043632 modification-dependent macromolecule catabolic process 25.0% (1/4) 6.09 0.014616 0.031938
GO:0005976 polysaccharide metabolic process 25.0% (1/4) 6.45 0.011423 0.032094
GO:0071554 cell wall organization or biogenesis 25.0% (1/4) 6.33 0.012363 0.033155
GO:1990234 transferase complex 25.0% (1/4) 6.27 0.012927 0.033159
GO:0140535 intracellular protein-containing complex 25.0% (1/4) 5.93 0.016302 0.033167
GO:0051603 proteolysis involved in protein catabolic process 25.0% (1/4) 5.94 0.016209 0.034154
GO:0005576 extracellular region 25.0% (1/4) 5.82 0.017613 0.034639
GO:0009057 macromolecule catabolic process 25.0% (1/4) 5.38 0.023866 0.044004
GO:0016758 hexosyltransferase activity 25.0% (1/4) 5.41 0.023307 0.04436
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms