Coexpression cluster: Cluster_311 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000347 THO complex 50.0% (1/2) 12.78 0.000142 0.002773
GO:0000445 THO complex part of transcription export complex 50.0% (1/2) 13.36 9.5e-05 0.003698
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 5.27 0.000667 0.005202
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.74 0.001398 0.005453
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.77 0.001345 0.00583
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.93 0.001071 0.005966
GO:0000725 recombinational repair 50.0% (1/2) 10.66 0.000616 0.006008
GO:0006302 double-strand break repair 50.0% (1/2) 10.04 0.000948 0.006161
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.81 0.001275 0.006216
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.49 0.001978 0.007014
GO:0000724 double-strand break repair via homologous recombination 50.0% (1/2) 10.78 0.000569 0.007394
GO:0006310 DNA recombination 50.0% (1/2) 8.75 0.002322 0.007545
GO:0006397 mRNA processing 50.0% (1/2) 7.38 0.006012 0.018035
GO:0016071 mRNA metabolic process 50.0% (1/2) 7.1 0.007287 0.0203
GO:0051716 cellular response to stimulus 50.0% (1/2) 6.23 0.013277 0.024657
GO:0033554 cellular response to stress 50.0% (1/2) 6.28 0.012806 0.024971
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 6.45 0.011439 0.026243
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.14 0.012797 0.026267
GO:0044237 cellular metabolic process 100.0% (2/2) 3.17 0.012271 0.026588
GO:0006396 RNA processing 50.0% (1/2) 5.89 0.016805 0.027309
GO:0006974 DNA damage response 50.0% (1/2) 6.46 0.011345 0.027654
GO:0006259 DNA metabolic process 50.0% (1/2) 5.91 0.016523 0.028018
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 2.99 0.015934 0.028247
GO:0006281 DNA repair 50.0% (1/2) 6.51 0.010968 0.028517
GO:0044238 primary metabolic process 100.0% (2/2) 2.75 0.022204 0.034638
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.64 0.025716 0.038575
GO:0008152 metabolic process 100.0% (2/2) 2.55 0.029154 0.040607
GO:0009987 cellular process 100.0% (2/2) 2.57 0.028326 0.040916
GO:0016070 RNA metabolic process 50.0% (1/2) 4.82 0.035099 0.047202
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms