Coexpression cluster: Cluster_7557 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071216 cellular response to biotic stimulus 100.0% (3/3) 14.07 0.0 0.0
GO:0072423 response to DNA damage checkpoint signaling 100.0% (3/3) 14.11 0.0 0.0
GO:0072402 response to DNA integrity checkpoint signaling 100.0% (3/3) 14.11 0.0 0.0
GO:0072396 response to cell cycle checkpoint signaling 100.0% (3/3) 14.11 0.0 0.0
GO:0009933 meristem structural organization 100.0% (3/3) 14.11 0.0 0.0
GO:0048532 anatomical structure arrangement 100.0% (3/3) 14.11 0.0 0.0
GO:0071495 cellular response to endogenous stimulus 100.0% (3/3) 12.12 0.0 0.0
GO:0040029 epigenetic regulation of gene expression 100.0% (3/3) 9.7 0.0 0.0
GO:0009719 response to endogenous stimulus 100.0% (3/3) 8.91 0.0 0.0
GO:0006338 chromatin remodeling 100.0% (3/3) 8.45 0.0 0.0
GO:0006325 chromatin organization 100.0% (3/3) 8.33 0.0 0.0
GO:0032502 developmental process 100.0% (3/3) 8.07 0.0 0.0
GO:0071824 protein-DNA complex organization 100.0% (3/3) 8.0 0.0 0.0
GO:0043933 protein-containing complex organization 100.0% (3/3) 6.79 1e-06 2e-06
GO:0051716 cellular response to stimulus 100.0% (3/3) 6.33 2e-06 5e-06
GO:0009607 response to biotic stimulus 100.0% (3/3) 5.65 8e-06 2e-05
GO:0016043 cellular component organization 100.0% (3/3) 5.24 1.9e-05 4.5e-05
GO:0071840 cellular component organization or biogenesis 100.0% (3/3) 5.08 2.6e-05 5.8e-05
GO:0009889 regulation of biosynthetic process 100.0% (3/3) 4.98 3.2e-05 5.9e-05
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (3/3) 5.01 3e-05 6.1e-05
GO:0031326 regulation of cellular biosynthetic process 100.0% (3/3) 4.98 3.2e-05 6.2e-05
GO:0010468 regulation of gene expression 100.0% (3/3) 5.02 2.9e-05 6.3e-05
GO:0031323 regulation of cellular metabolic process 100.0% (3/3) 4.87 4e-05 6.8e-05
GO:0060255 regulation of macromolecule metabolic process 100.0% (3/3) 4.88 3.9e-05 7e-05
GO:0019222 regulation of metabolic process 100.0% (3/3) 4.82 4.4e-05 7.2e-05
GO:0005634 nucleus 100.0% (3/3) 4.76 5.1e-05 8e-05
GO:0050896 response to stimulus 100.0% (3/3) 4.63 6.6e-05 0.000101
GO:0050794 regulation of cellular process 100.0% (3/3) 4.31 0.000128 0.000188
GO:0050789 regulation of biological process 100.0% (3/3) 4.24 0.000148 0.00021
GO:0065007 biological regulation 100.0% (3/3) 4.14 0.000184 0.000251
GO:0043227 membrane-bounded organelle 100.0% (3/3) 3.82 0.000353 0.000452
GO:0043231 intracellular membrane-bounded organelle 100.0% (3/3) 3.83 0.000345 0.000456
GO:0043226 organelle 100.0% (3/3) 3.62 0.000542 0.000654
GO:0043229 intracellular organelle 100.0% (3/3) 3.62 0.000542 0.000674
GO:0110165 cellular anatomical entity 100.0% (3/3) 2.5 0.005519 0.006466
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.007121
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.008854
GO:0005515 protein binding 66.67% (2/3) 3.15 0.01599 0.017252
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.022628
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms