Coexpression cluster: Cluster_186 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016108 tetraterpenoid metabolic process 2.67% (2/75) 7.14 8.7e-05 0.013729
GO:0016116 carotenoid metabolic process 2.67% (2/75) 7.14 8.7e-05 0.013729
GO:0016859 cis-trans isomerase activity 4.0% (3/75) 4.79 0.00018 0.01713
GO:0071704 organic substance metabolic process 32.0% (24/75) 1.0 0.00046 0.019881
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4.0% (3/75) 4.81 0.000172 0.020385
GO:0044255 cellular lipid metabolic process 8.0% (6/75) 3.24 4.4e-05 0.020918
GO:0006629 lipid metabolic process 8.0% (6/75) 2.62 0.000441 0.020944
GO:0042579 microbody 2.67% (2/75) 6.05 0.000417 0.021998
GO:0005777 peroxisome 2.67% (2/75) 6.33 0.00028 0.022155
GO:0044238 primary metabolic process 30.67% (23/75) 1.04 0.000407 0.024152
GO:0009987 cellular process 33.33% (25/75) 0.99 0.000373 0.025319
GO:0006720 isoprenoid metabolic process 4.0% (3/75) 4.17 0.000644 0.025488
GO:0008150 biological_process 46.67% (35/75) 0.69 0.000818 0.027744
GO:0019637 organophosphate metabolic process 6.67% (5/75) 2.8 0.000774 0.028276
GO:0003674 molecular_function 61.33% (46/75) 0.52 0.000897 0.0284
GO:0006404 RNA import into nucleus 1.33% (1/75) 9.14 0.001778 0.032477
GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor 1.33% (1/75) 9.14 0.001778 0.032477
GO:0004400 histidinol-phosphate transaminase activity 1.33% (1/75) 9.14 0.001778 0.032477
GO:0016236 macroautophagy 1.33% (1/75) 9.14 0.001778 0.032477
GO:0016166 phytoene dehydrogenase activity 1.33% (1/75) 9.14 0.001778 0.032477
GO:0004368 glycerol-3-phosphate dehydrogenase (quinone) activity 1.33% (1/75) 9.14 0.001778 0.032477
GO:0006285 base-excision repair, AP site formation 1.33% (1/75) 9.14 0.001778 0.032477
GO:0061015 snRNA import into nucleus 1.33% (1/75) 9.14 0.001778 0.032477
GO:0008152 metabolic process 32.0% (24/75) 0.91 0.001154 0.034258
GO:0000413 protein peptidyl-prolyl isomerization 2.67% (2/75) 5.18 0.001402 0.037006
GO:0018208 peptidyl-proline modification 2.67% (2/75) 5.18 0.001402 0.037006
GO:0006644 phospholipid metabolic process 4.0% (3/75) 3.54 0.002241 0.039417
GO:0006851 mitochondrial calcium ion transmembrane transport 1.33% (1/75) 8.14 0.003552 0.042184
GO:0010028 xanthophyll cycle 1.33% (1/75) 8.14 0.003552 0.042184
GO:0106035 protein maturation by [4Fe-4S] cluster transfer 1.33% (1/75) 8.14 0.003552 0.042184
GO:0031519 PcG protein complex 1.33% (1/75) 8.14 0.003552 0.042184
GO:0046422 violaxanthin de-epoxidase activity 1.33% (1/75) 8.14 0.003552 0.042184
GO:0006513 protein monoubiquitination 1.33% (1/75) 8.14 0.003552 0.042184
GO:0051030 snRNA transport 1.33% (1/75) 8.14 0.003552 0.042184
GO:0010390 histone monoubiquitination 1.33% (1/75) 8.14 0.003552 0.042184
GO:0016574 histone ubiquitination 1.33% (1/75) 8.14 0.003552 0.042184
GO:0016122 xanthophyll metabolic process 1.33% (1/75) 8.14 0.003552 0.042184
GO:0005488 binding 42.67% (32/75) 0.65 0.002787 0.047278
GO:0044237 cellular metabolic process 22.67% (17/75) 1.03 0.003013 0.047699
GO:0051604 protein maturation 2.67% (2/75) 4.64 0.002938 0.048121
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms