Coexpression cluster: Cluster_178 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016853 isomerase activity 6.67% (4/60) 3.81 0.000198 0.010211
GO:0015979 photosynthesis 5.0% (3/60) 4.6 0.000266 0.011447
GO:0009521 photosystem 5.0% (3/60) 4.79 0.000179 0.011516
GO:0006091 generation of precursor metabolites and energy 6.67% (4/60) 3.95 0.000135 0.011635
GO:0016846 carbon-sulfur lyase activity 3.33% (2/60) 6.87 0.00013 0.016779
GO:0009523 photosystem II 5.0% (3/60) 5.24 7.2e-05 0.018534
GO:0009654 photosystem II oxygen evolving complex 3.33% (2/60) 5.76 0.000632 0.023306
GO:0004750 D-ribulose-phosphate 3-epimerase activity 1.67% (1/60) 9.46 0.001422 0.024461
GO:0050017 L-3-cyanoalanine synthase activity 1.67% (1/60) 9.46 0.001422 0.024461
GO:0019499 cyanide metabolic process 1.67% (1/60) 9.46 0.001422 0.024461
GO:0015671 oxygen transport 1.67% (1/60) 9.46 0.001422 0.024461
GO:0005344 oxygen carrier activity 1.67% (1/60) 9.46 0.001422 0.024461
GO:0015669 gas transport 1.67% (1/60) 9.46 0.001422 0.024461
GO:0098796 membrane protein complex 6.67% (4/60) 3.29 0.000768 0.024763
GO:0051537 2 iron, 2 sulfur cluster binding 3.33% (2/60) 5.33 0.001148 0.032914
GO:0046872 metal ion binding 15.0% (9/60) 1.64 0.002219 0.035785
GO:0043169 cation binding 15.0% (9/60) 1.59 0.002769 0.042018
GO:0016859 cis-trans isomerase activity 3.33% (2/60) 4.53 0.003449 0.046828
GO:1990204 oxidoreductase complex 3.33% (2/60) 4.48 0.003674 0.04739
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.33% (2/60) 4.55 0.003339 0.047852
GO:0009052 pentose-phosphate shunt, non-oxidative branch 1.67% (1/60) 7.87 0.004261 0.049965
GO:0004751 ribose-5-phosphate isomerase activity 1.67% (1/60) 7.87 0.004261 0.049965
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (60) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms