Coexpression cluster: Cluster_126 (Oryza sativa HCCA coexpression clusters - Wang et al (2014))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004843 cysteine-type deubiquitinase activity 4.21% (4/95) 4.96 9e-06 0.0021
GO:0101005 deubiquitinase activity 4.21% (4/95) 4.55 2.7e-05 0.0022
GO:0019783 ubiquitin-like protein peptidase activity 4.21% (4/95) 4.47 3.3e-05 0.002309
GO:0003674 molecular_function 64.21% (61/95) 0.59 2e-05 0.002394
GO:0005515 protein binding 26.32% (25/95) 1.39 5e-06 0.002459
GO:0036211 protein modification process 16.84% (16/95) 1.71 2.7e-05 0.002575
GO:0008150 biological_process 49.47% (47/95) 0.78 1.8e-05 0.002932
GO:0043412 macromolecule modification 16.84% (16/95) 1.6 6.4e-05 0.00386
GO:0005488 binding 45.26% (43/95) 0.73 0.000122 0.006533
GO:0008375 acetylglucosaminyltransferase activity 2.11% (2/95) 6.79 0.000139 0.006726
GO:0072665 protein localization to vacuole 2.11% (2/95) 5.99 0.000449 0.00942
GO:0072666 establishment of protein localization to vacuole 2.11% (2/95) 5.99 0.000449 0.00942
GO:0051179 localization 11.58% (11/95) 1.73 0.000483 0.009717
GO:0051234 establishment of localization 11.58% (11/95) 1.75 0.000436 0.010023
GO:0043632 modification-dependent macromolecule catabolic process 4.21% (4/95) 3.52 0.00043 0.010391
GO:0019941 modification-dependent protein catabolic process 4.21% (4/95) 3.52 0.00043 0.010391
GO:0006511 ubiquitin-dependent protein catabolic process 4.21% (4/95) 3.52 0.00043 0.010391
GO:0016579 protein deubiquitination 3.16% (3/95) 4.65 0.000239 0.010485
GO:0033365 protein localization to organelle 3.16% (3/95) 4.5 0.000328 0.010566
GO:0072594 establishment of protein localization to organelle 3.16% (3/95) 4.52 0.000312 0.010763
GO:0006886 intracellular protein transport 4.21% (4/95) 3.59 0.000361 0.010907
GO:0006810 transport 11.58% (11/95) 1.77 0.00039 0.01109
GO:0009987 cellular process 31.58% (30/95) 0.91 0.000301 0.011178
GO:0070646 protein modification by small protein removal 3.16% (3/95) 4.57 0.000281 0.011317
GO:0051603 proteolysis involved in protein catabolic process 4.21% (4/95) 3.37 0.000636 0.011381
GO:0015318 inorganic molecular entity transmembrane transporter activity 5.26% (5/95) 2.88 0.000613 0.011396
GO:0016740 transferase activity 20.0% (19/95) 1.17 0.00061 0.01179
GO:0071705 nitrogen compound transport 5.26% (5/95) 2.79 0.000807 0.013445
GO:0043170 macromolecule metabolic process 23.16% (22/95) 1.03 0.000786 0.013556
GO:0019538 protein metabolic process 18.95% (18/95) 1.17 0.000886 0.014267
GO:0070647 protein modification by small protein conjugation or removal 5.26% (5/95) 2.71 0.001044 0.016259
GO:1901564 organonitrogen compound metabolic process 21.05% (20/95) 1.06 0.001165 0.017583
GO:0032991 protein-containing complex 9.47% (9/95) 1.77 0.001327 0.01942
GO:0015031 protein transport 4.21% (4/95) 3.05 0.001453 0.020057
GO:0006807 nitrogen compound metabolic process 24.21% (23/95) 0.94 0.00142 0.020171
GO:1905368 peptidase complex 2.11% (2/95) 5.09 0.001574 0.02112
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 1.05% (1/95) 8.79 0.002252 0.021326
GO:0001731 formation of translation preinitiation complex 1.05% (1/95) 8.79 0.002252 0.021326
GO:0016251 RNA polymerase II general transcription initiation factor activity 1.05% (1/95) 8.79 0.002252 0.021326
GO:0070727 cellular macromolecule localization 4.21% (4/95) 2.89 0.002136 0.021497
GO:0033036 macromolecule localization 4.21% (4/95) 2.89 0.002136 0.021497
GO:0008104 protein localization 4.21% (4/95) 2.89 0.002136 0.021497
GO:0016192 vesicle-mediated transport 4.21% (4/95) 2.86 0.002337 0.021703
GO:1901575 organic substance catabolic process 6.32% (6/95) 2.26 0.001677 0.021895
GO:0006357 regulation of transcription by RNA polymerase II 3.16% (3/95) 3.5 0.002448 0.021896
GO:0016758 hexosyltransferase activity 4.21% (4/95) 2.84 0.002441 0.022248
GO:0006486 protein glycosylation 3.16% (3/95) 3.65 0.001804 0.022343
GO:0043413 macromolecule glycosylation 3.16% (3/95) 3.65 0.001804 0.022343
GO:0046907 intracellular transport 4.21% (4/95) 2.91 0.002041 0.022402
GO:0051649 establishment of localization in cell 4.21% (4/95) 2.9 0.002104 0.022585
GO:0009056 catabolic process 6.32% (6/95) 2.2 0.002018 0.022671
GO:0016592 mediator complex 2.11% (2/95) 4.71 0.002686 0.022757
GO:0043687 post-translational protein modification 5.26% (5/95) 2.51 0.001952 0.022994
GO:0070085 glycosylation 3.16% (3/95) 3.6 0.002005 0.02306
GO:0044238 primary metabolic process 26.32% (25/95) 0.82 0.002681 0.023124
GO:0009057 macromolecule catabolic process 4.21% (4/95) 2.81 0.00266 0.023364
GO:0045184 establishment of protein localization 4.21% (4/95) 2.93 0.001948 0.023526
GO:0071702 organic substance transport 5.26% (5/95) 2.37 0.00291 0.024233
GO:0140096 catalytic activity, acting on a protein 15.79% (15/95) 1.14 0.003064 0.025086
GO:1901702 salt transmembrane transporter activity 3.16% (3/95) 3.36 0.003218 0.025906
GO:1990234 transferase complex 3.16% (3/95) 3.28 0.003728 0.029522
GO:0098660 inorganic ion transmembrane transport 3.16% (3/95) 3.21 0.004286 0.033386
GO:0140223 general transcription initiation factor activity 1.05% (1/95) 7.79 0.004499 0.033427
GO:0060548 obsolete negative regulation of cell death 1.05% (1/95) 7.79 0.004499 0.033427
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 1.05% (1/95) 7.79 0.004499 0.033427
GO:0006195 purine nucleotide catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009185 ribonucleoside diphosphate metabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009191 ribonucleoside diphosphate catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0072526 pyridine-containing compound catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0019364 pyridine nucleotide catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009261 ribonucleotide catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0072523 purine-containing compound catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0006096 glycolytic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0046032 ADP catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009137 purine nucleoside diphosphate catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0046031 ADP metabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009135 purine nucleoside diphosphate metabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009181 purine ribonucleoside diphosphate catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009154 purine ribonucleotide catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0009134 nucleoside diphosphate catabolic process 2.11% (2/95) 3.94 0.007641 0.040114
GO:0015698 inorganic anion transport 2.11% (2/95) 4.18 0.005508 0.040306
GO:0006623 protein targeting to vacuole 1.05% (1/95) 6.79 0.008977 0.040523
GO:0046337 phosphatidylethanolamine metabolic process 1.05% (1/95) 6.79 0.008977 0.040523
GO:0004306 ethanolamine-phosphate cytidylyltransferase activity 1.05% (1/95) 6.79 0.008977 0.040523
GO:0006646 phosphatidylethanolamine biosynthetic process 1.05% (1/95) 6.79 0.008977 0.040523
GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity 1.05% (1/95) 6.79 0.008977 0.040523
GO:0051017 actin filament bundle assembly 1.05% (1/95) 6.79 0.008977 0.040523
GO:0061572 actin filament bundle organization 1.05% (1/95) 6.79 0.008977 0.040523
GO:0009132 nucleoside diphosphate metabolic process 2.11% (2/95) 3.91 0.007897 0.041015
GO:0015079 potassium ion transmembrane transporter activity 2.11% (2/95) 4.15 0.005729 0.041298
GO:0008152 metabolic process 27.37% (26/95) 0.68 0.008057 0.041399
GO:0009166 nucleotide catabolic process 2.11% (2/95) 3.89 0.008158 0.041475
GO:0097435 supramolecular fiber organization 2.11% (2/95) 3.86 0.008422 0.041508
GO:0005543 phospholipid binding 2.11% (2/95) 3.86 0.008422 0.041508
GO:0003712 transcription coregulator activity 2.11% (2/95) 3.86 0.008422 0.041508
GO:0005667 transcription regulator complex 2.11% (2/95) 3.84 0.00869 0.042397
GO:1901292 nucleoside phosphate catabolic process 2.11% (2/95) 3.82 0.008962 0.043286
GO:0060962 regulation of ribosomal protein gene transcription by RNA polymerase II 1.05% (1/95) 7.21 0.00674 0.043407
GO:0046695 SLIK (SAGA-like) complex 1.05% (1/95) 7.21 0.00674 0.043407
GO:0034511 U3 snoRNA binding 1.05% (1/95) 7.21 0.00674 0.043407
GO:1902494 catalytic complex 4.21% (4/95) 2.46 0.006219 0.043534
GO:0007015 actin filament organization 2.11% (2/95) 4.09 0.006183 0.043918
GO:0051641 cellular localization 4.21% (4/95) 2.44 0.00649 0.044152
GO:0006813 potassium ion transport 2.11% (2/95) 4.07 0.006416 0.044271
GO:0008194 UDP-glycosyltransferase activity 4.21% (4/95) 2.43 0.006699 0.044937
GO:0071704 organic substance metabolic process 26.32% (25/95) 0.71 0.007077 0.044979
GO:0035251 UDP-glucosyltransferase activity 2.11% (2/95) 3.73 0.010087 0.045111
GO:0046434 organophosphate catabolic process 2.11% (2/95) 3.71 0.010377 0.045984
GO:0016772 transferase activity, transferring phosphorus-containing groups 10.53% (10/95) 1.21 0.011284 0.04823
GO:0016255 attachment of GPI anchor to protein 1.05% (1/95) 6.47 0.011209 0.048338
GO:0015098 molybdate ion transmembrane transporter activity 1.05% (1/95) 6.47 0.011209 0.048338
GO:0015689 molybdate ion transport 1.05% (1/95) 6.47 0.011209 0.048338
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (95) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms