Coexpression cluster: Cluster_198 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 21.67% (13/60) 4.2 0.0 0.0
GO:0005840 ribosome 18.33% (11/60) 4.28 0.0 0.0
GO:0043043 peptide biosynthetic process 18.33% (11/60) 4.13 0.0 0.0
GO:0003735 structural constituent of ribosome 18.33% (11/60) 4.16 0.0 0.0
GO:0006412 translation 18.33% (11/60) 4.17 0.0 0.0
GO:0043604 amide biosynthetic process 18.33% (11/60) 4.03 0.0 0.0
GO:0006518 peptide metabolic process 18.33% (11/60) 4.05 0.0 0.0
GO:0043603 amide metabolic process 18.33% (11/60) 3.89 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 18.33% (11/60) 3.89 0.0 0.0
GO:0043228 non-membrane-bounded organelle 18.33% (11/60) 3.89 0.0 0.0
GO:0009059 macromolecule biosynthetic process 18.33% (11/60) 3.23 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 18.33% (11/60) 3.13 0.0 1e-06
GO:0043226 organelle 20.0% (12/60) 2.86 0.0 1e-06
GO:0043229 intracellular organelle 20.0% (12/60) 2.86 0.0 1e-06
GO:0044271 cellular nitrogen compound biosynthetic process 18.33% (11/60) 2.93 0.0 3e-06
GO:0005575 cellular_component 33.33% (20/60) 1.68 1e-06 2.2e-05
GO:0071439 clathrin complex 3.33% (2/60) 9.17 3e-06 4e-05
GO:0032051 clathrin light chain binding 3.33% (2/60) 9.17 3e-06 4e-05
GO:0034641 cellular nitrogen compound metabolic process 23.33% (14/60) 2.08 4e-06 4.5e-05
GO:0110165 cellular anatomical entity 26.67% (16/60) 1.8 8e-06 9.2e-05
GO:0044249 cellular biosynthetic process 18.33% (11/60) 2.28 1.4e-05 0.000156
GO:1901576 organic substance biosynthetic process 18.33% (11/60) 2.18 2.6e-05 0.000284
GO:0030130 clathrin coat of trans-Golgi network vesicle 3.33% (2/60) 7.59 4.4e-05 0.00041
GO:0030118 clathrin coat 3.33% (2/60) 7.59 4.4e-05 0.00041
GO:0030132 clathrin coat of coated pit 3.33% (2/60) 7.59 4.4e-05 0.00041
GO:0030125 clathrin vesicle coat 3.33% (2/60) 7.59 4.4e-05 0.00041
GO:0003723 RNA binding 13.33% (8/60) 2.61 4.6e-05 0.000413
GO:0009058 biosynthetic process 18.33% (11/60) 2.06 5.5e-05 0.000476
GO:0003743 translation initiation factor activity 5.0% (3/60) 5.08 9.7e-05 0.00081
GO:0005852 eukaryotic translation initiation factor 3 complex 3.33% (2/60) 6.0 0.000445 0.003573
GO:0090079 translation regulator activity, nucleic acid binding 5.0% (3/60) 4.28 0.000507 0.003703
GO:0008135 translation factor activity, RNA binding 5.0% (3/60) 4.28 0.000507 0.003703
GO:0030276 clathrin binding 3.33% (2/60) 5.92 0.000497 0.003861
GO:0045182 translation regulator activity 5.0% (3/60) 4.2 0.000595 0.004216
GO:0098797 plasma membrane protein complex 3.33% (2/60) 5.65 0.000731 0.005037
GO:0030120 vesicle coat 3.33% (2/60) 5.17 0.00142 0.009504
GO:0003676 nucleic acid binding 20.0% (12/60) 1.36 0.002011 0.013096
GO:0019538 protein metabolic process 21.67% (13/60) 1.26 0.002395 0.015187
GO:0030117 membrane coat 3.33% (2/60) 4.65 0.002917 0.018023
GO:0000338 protein deneddylation 1.67% (1/60) 8.17 0.003467 0.020888
GO:0032991 protein-containing complex 11.67% (7/60) 1.76 0.004385 0.025778
GO:0008180 COP9 signalosome 1.67% (1/60) 7.59 0.005196 0.029814
GO:0003674 molecular_function 68.33% (41/60) 0.41 0.005482 0.030724
GO:0004725 protein tyrosine phosphatase activity 1.67% (1/60) 7.17 0.006922 0.03707
GO:0008097 5S rRNA binding 1.67% (1/60) 7.17 0.006922 0.03707
GO:0043170 macromolecule metabolic process 25.0% (15/60) 0.97 0.007311 0.038305
GO:0071786 endoplasmic reticulum tubular network organization 1.67% (1/60) 6.85 0.008645 0.044328
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (60) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms