Coexpression cluster: Cluster_155 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016817 hydrolase activity, acting on acid anhydrides 9.09% (17/187) 2.6 0.0 1e-06
GO:0017111 ribonucleoside triphosphate phosphatase activity 9.09% (17/187) 2.72 0.0 1e-06
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.09% (17/187) 2.6 0.0 1e-06
GO:0016462 pyrophosphatase activity 9.09% (17/187) 2.63 0.0 1e-06
GO:0022607 cellular component assembly 5.88% (11/187) 3.28 0.0 3e-06
GO:0016070 RNA metabolic process 9.63% (18/187) 2.08 0.0 3.2e-05
GO:0016887 ATP hydrolysis activity 5.88% (11/187) 2.79 1e-06 5.8e-05
GO:0090304 nucleic acid metabolic process 11.23% (21/187) 1.76 1e-06 8.8e-05
GO:0006725 cellular aromatic compound metabolic process 13.37% (25/187) 1.52 2e-06 0.000158
GO:0006139 nucleobase-containing compound metabolic process 12.3% (23/187) 1.57 3e-06 0.00018
GO:0035639 purine ribonucleoside triphosphate binding 17.65% (33/187) 1.23 4e-06 0.000183
GO:1901360 organic cyclic compound metabolic process 13.37% (25/187) 1.49 3e-06 0.00019
GO:0046483 heterocycle metabolic process 12.83% (24/187) 1.51 4e-06 0.000199
GO:0006396 RNA processing 5.88% (11/187) 2.49 5e-06 0.000201
GO:0071840 cellular component organization or biogenesis 8.56% (16/187) 1.94 5e-06 0.000214
GO:0032991 protein-containing complex 10.7% (20/187) 1.64 8e-06 0.000272
GO:0043170 macromolecule metabolic process 24.6% (46/187) 0.95 8e-06 0.000284
GO:0140657 ATP-dependent activity 6.95% (13/187) 2.13 1e-05 0.000351
GO:0022618 protein-RNA complex assembly 2.14% (4/187) 4.78 1.3e-05 0.000418
GO:0003746 translation elongation factor activity 2.14% (4/187) 4.67 1.8e-05 0.000485
GO:1901265 nucleoside phosphate binding 19.79% (37/187) 1.04 1.7e-05 0.000488
GO:0000166 nucleotide binding 19.79% (37/187) 1.04 1.7e-05 0.000488
GO:0043168 anion binding 19.79% (37/187) 1.03 2e-05 0.000532
GO:0071826 protein-RNA complex organization 2.14% (4/187) 4.53 2.6e-05 0.00059
GO:0005488 binding 47.06% (88/187) 0.53 2.6e-05 0.000607
GO:0032555 purine ribonucleotide binding 18.18% (34/187) 1.07 2.9e-05 0.000616
GO:0009987 cellular process 33.69% (63/187) 0.7 2.6e-05 0.000618
GO:0016043 cellular component organization 7.49% (14/187) 1.91 2.5e-05 0.000634
GO:0017076 purine nucleotide binding 18.72% (35/187) 1.04 3.2e-05 0.000635
GO:0006807 nitrogen compound metabolic process 25.67% (48/187) 0.84 3.1e-05 0.000644
GO:0034641 cellular nitrogen compound metabolic process 13.37% (25/187) 1.28 3.8e-05 0.000675
GO:0006414 translational elongation 2.14% (4/187) 4.4 3.8e-05 0.000695
GO:1901363 heterocyclic compound binding 19.79% (37/187) 0.99 3.8e-05 0.00071
GO:0032553 ribonucleotide binding 18.18% (34/187) 1.05 3.7e-05 0.000718
GO:0036094 small molecule binding 19.79% (37/187) 0.98 4.5e-05 0.000749
GO:0097367 carbohydrate derivative binding 18.18% (34/187) 1.04 4.4e-05 0.00075
GO:0008152 metabolic process 32.09% (60/187) 0.69 5.2e-05 0.000847
GO:0006397 mRNA processing 3.21% (6/187) 3.14 6.6e-05 0.001053
GO:0008150 biological_process 47.59% (89/187) 0.48 0.000106 0.001638
GO:0097159 organic cyclic compound binding 29.95% (56/187) 0.68 0.000139 0.002088
GO:0042274 ribosomal small subunit biogenesis 1.07% (2/187) 6.53 0.000173 0.002548
GO:0065003 protein-containing complex assembly 3.21% (6/187) 2.87 0.000186 0.002671
GO:0016071 mRNA metabolic process 3.21% (6/187) 2.84 0.000207 0.002771
GO:0008380 RNA splicing 2.67% (5/187) 3.24 0.000198 0.002777
GO:0005524 ATP binding 14.44% (27/187) 1.07 0.000204 0.00279
GO:0016787 hydrolase activity 15.51% (29/187) 1.01 0.000233 0.003058
GO:0044237 cellular metabolic process 22.99% (43/187) 0.77 0.000283 0.00363
GO:0031072 heat shock protein binding 1.6% (3/187) 4.53 0.00029 0.003638
GO:0043933 protein-containing complex organization 3.74% (7/187) 2.45 0.000324 0.003985
GO:0043167 ion binding 24.6% (46/187) 0.72 0.000363 0.004383
GO:0003674 molecular_function 63.64% (119/187) 0.31 0.000416 0.004819
GO:0022613 ribonucleoprotein complex biogenesis 1.6% (3/187) 4.36 0.000414 0.004889
GO:0000502 proteasome complex 1.07% (2/187) 5.95 0.00043 0.004893
GO:0071704 organic substance metabolic process 28.88% (54/187) 0.63 0.000443 0.004948
GO:0003924 GTPase activity 3.21% (6/187) 2.61 0.000488 0.005348
GO:0098799 outer mitochondrial membrane protein complex 1.07% (2/187) 5.72 0.0006 0.006237
GO:0005742 mitochondrial outer membrane translocase complex 1.07% (2/187) 5.72 0.0006 0.006237
GO:0031163 metallo-sulfur cluster assembly 1.6% (3/187) 4.16 0.000625 0.006286
GO:0016226 iron-sulfur cluster assembly 1.6% (3/187) 4.16 0.000625 0.006286
GO:0006457 protein folding 2.67% (5/187) 2.9 0.000586 0.006315
GO:0003676 nucleic acid binding 14.97% (28/187) 0.94 0.000641 0.006335
GO:0140513 nuclear protein-containing complex 3.74% (7/187) 2.28 0.000658 0.006402
GO:0000398 mRNA splicing, via spliceosome 2.14% (4/187) 3.34 0.000673 0.006445
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.14% (4/187) 3.19 0.000995 0.009378
GO:0030554 adenyl nucleotide binding 15.51% (29/187) 0.88 0.001053 0.009618
GO:0032559 adenyl ribonucleotide binding 14.97% (28/187) 0.9 0.001043 0.009673
GO:0000375 RNA splicing, via transesterification reactions 2.14% (4/187) 3.12 0.001191 0.010721
GO:0003824 catalytic activity 36.36% (68/187) 0.48 0.001321 0.011716
GO:0005525 GTP binding 3.21% (6/187) 2.32 0.001366 0.011771
GO:0032561 guanyl ribonucleotide binding 3.21% (6/187) 2.32 0.001366 0.011771
GO:0090079 translation regulator activity, nucleic acid binding 2.14% (4/187) 3.06 0.001413 0.011831
GO:0008135 translation factor activity, RNA binding 2.14% (4/187) 3.06 0.001413 0.011831
GO:0019001 guanyl nucleotide binding 3.21% (6/187) 2.28 0.001564 0.012748
GO:0042176 regulation of protein catabolic process 1.07% (2/187) 5.07 0.001549 0.012795
GO:0051536 iron-sulfur cluster binding 2.14% (4/187) 2.98 0.001728 0.013531
GO:0051540 metal cluster binding 2.14% (4/187) 2.98 0.001728 0.013531
GO:0045182 translation regulator activity 2.14% (4/187) 2.98 0.001728 0.013531
GO:0070647 protein modification by small protein conjugation or removal 3.74% (7/187) 2.02 0.001868 0.014438
GO:0016579 protein deubiquitination 1.6% (3/187) 3.59 0.00199 0.015192
GO:0036402 proteasome-activating activity 1.07% (2/187) 4.83 0.002181 0.016039
GO:0006270 DNA replication initiation 1.07% (2/187) 4.83 0.002181 0.016039
GO:1905369 endopeptidase complex 1.07% (2/187) 4.83 0.002181 0.016039
GO:0070646 protein modification by small protein removal 1.6% (3/187) 3.53 0.00225 0.016151
GO:0030163 protein catabolic process 1.6% (3/187) 3.53 0.00225 0.016151
GO:0044238 primary metabolic process 25.67% (48/187) 0.58 0.002305 0.01635
GO:0009057 macromolecule catabolic process 3.21% (6/187) 2.14 0.002531 0.017749
GO:0008186 ATP-dependent activity, acting on RNA 1.6% (3/187) 3.44 0.002677 0.018344
GO:0003724 RNA helicase activity 1.6% (3/187) 3.44 0.002677 0.018344
GO:0140694 non-membrane-bounded organelle assembly 1.07% (2/187) 4.62 0.002915 0.019752
GO:0004386 helicase activity 2.67% (5/187) 2.37 0.002972 0.019915
GO:0009894 regulation of catabolic process 1.07% (2/187) 4.53 0.00332 0.02176
GO:0008641 ubiquitin-like modifier activating enzyme activity 1.07% (2/187) 4.53 0.00332 0.02176
GO:0005575 cellular_component 17.11% (32/187) 0.72 0.003433 0.022261
GO:0043687 post-translational protein modification 3.74% (7/187) 1.78 0.004671 0.029341
GO:0051082 unfolded protein binding 1.6% (3/187) 3.16 0.004655 0.029549
GO:0004843 cysteine-type deubiquitinase activity 1.6% (3/187) 3.16 0.004655 0.029549
GO:0006283 transcription-coupled nucleotide-excision repair 0.53% (1/187) 7.53 0.005407 0.031655
GO:0000493 box H/ACA snoRNP assembly 0.53% (1/187) 7.53 0.005407 0.031655
GO:0008430 selenium binding 0.53% (1/187) 7.53 0.005407 0.031655
GO:0034975 protein folding in endoplasmic reticulum 0.53% (1/187) 7.53 0.005407 0.031655
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 0.53% (1/187) 7.53 0.005407 0.031655
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 0.53% (1/187) 7.53 0.005407 0.031655
GO:0070985 transcription factor TFIIK complex 0.53% (1/187) 7.53 0.005407 0.031655
GO:0043130 ubiquitin binding 1.07% (2/187) 4.14 0.005708 0.032779
GO:0032182 ubiquitin-like protein binding 1.07% (2/187) 4.14 0.005708 0.032779
GO:0009408 response to heat 1.07% (2/187) 4.07 0.006256 0.03559
GO:0140640 catalytic activity, acting on a nucleic acid 4.81% (9/187) 1.43 0.006809 0.03802
GO:0005667 transcription regulator complex 1.6% (3/187) 2.97 0.00679 0.038267
GO:0008234 cysteine-type peptidase activity 2.67% (5/187) 2.07 0.007063 0.039076
GO:0070925 organelle assembly 1.07% (2/187) 3.95 0.007422 0.039962
GO:0005681 spliceosomal complex 1.07% (2/187) 3.95 0.007422 0.039962
GO:0101005 deubiquitinase activity 1.6% (3/187) 2.93 0.007331 0.04019
GO:0019783 ubiquitin-like protein peptidase activity 1.6% (3/187) 2.91 0.007611 0.040616
GO:0016877 ligase activity, forming carbon-sulfur bonds 1.07% (2/187) 3.89 0.008039 0.042524
GO:0006364 rRNA processing 1.6% (3/187) 2.87 0.00819 0.042943
GO:1905368 peptidase complex 1.07% (2/187) 3.78 0.00934 0.04855
GO:0008233 peptidase activity 4.81% (9/187) 1.35 0.009559 0.049268
GO:0000245 spliceosomal complex assembly 0.53% (1/187) 6.53 0.010785 0.049269
GO:0032806 carboxy-terminal domain protein kinase complex 0.53% (1/187) 6.53 0.010785 0.049269
GO:0045144 meiotic sister chromatid segregation 0.53% (1/187) 6.53 0.010785 0.049269
GO:0034090 maintenance of meiotic sister chromatid cohesion 0.53% (1/187) 6.53 0.010785 0.049269
GO:0034086 maintenance of sister chromatid cohesion 0.53% (1/187) 6.53 0.010785 0.049269
GO:0016428 tRNA (cytidine-5-)-methyltransferase activity 0.53% (1/187) 6.53 0.010785 0.049269
GO:0005675 transcription factor TFIIH holo complex 0.53% (1/187) 6.53 0.010785 0.049269
GO:0016427 tRNA (cytidine) methyltransferase activity 0.53% (1/187) 6.53 0.010785 0.049269
GO:0000491 small nucleolar ribonucleoprotein complex assembly 0.53% (1/187) 6.53 0.010785 0.049269
GO:0004325 ferrochelatase activity 0.53% (1/187) 6.53 0.010785 0.049269
GO:0001401 SAM complex 0.53% (1/187) 6.53 0.010785 0.049269
GO:0000974 Prp19 complex 0.53% (1/187) 6.53 0.010785 0.049269
GO:0042134 rRNA primary transcript binding 0.53% (1/187) 6.53 0.010785 0.049269
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (187) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms