Coexpression cluster: Cluster_67 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051169 nuclear transport 4.13% (5/121) 4.67 2e-06 0.000338
GO:0051641 cellular localization 7.44% (9/121) 2.94 3e-06 0.000415
GO:0006913 nucleocytoplasmic transport 4.13% (5/121) 4.73 1e-06 0.000563
GO:0051020 GTPase binding 2.48% (3/121) 5.66 2.7e-05 0.001054
GO:0031267 small GTPase binding 2.48% (3/121) 5.66 2.7e-05 0.001054
GO:0051649 establishment of localization in cell 5.79% (7/121) 3.03 2.6e-05 0.001228
GO:0070727 cellular macromolecule localization 5.79% (7/121) 3.03 2.6e-05 0.001228
GO:0033036 macromolecule localization 5.79% (7/121) 3.03 2.6e-05 0.001228
GO:0008104 protein localization 5.79% (7/121) 3.03 2.6e-05 0.001228
GO:0046907 intracellular transport 5.79% (7/121) 3.05 2.4e-05 0.002044
GO:0045184 establishment of protein localization 5.79% (7/121) 3.07 2.2e-05 0.002359
GO:0033365 protein localization to organelle 3.31% (4/121) 4.09 9.2e-05 0.002999
GO:0072594 establishment of protein localization to organelle 3.31% (4/121) 4.11 8.7e-05 0.003063
GO:0015031 protein transport 4.96% (6/121) 3.0 0.000114 0.00345
GO:0071705 nitrogen compound transport 5.79% (7/121) 2.63 0.000151 0.004245
GO:0071702 organic substance transport 6.61% (8/121) 2.38 0.000163 0.004311
GO:0043414 macromolecule methylation 3.31% (4/121) 3.78 0.000212 0.004973
GO:0006886 intracellular protein transport 4.13% (5/121) 3.23 0.000203 0.00504
GO:0140640 catalytic activity, acting on a nucleic acid 7.44% (9/121) 2.06 0.00034 0.005993
GO:0032259 methylation 3.31% (4/121) 3.56 0.000384 0.00602
GO:0016273 arginine N-methyltransferase activity 1.65% (2/121) 5.99 0.00043 0.006064
GO:0016274 protein-arginine N-methyltransferase activity 1.65% (2/121) 5.99 0.00043 0.006064
GO:0006479 protein methylation 2.48% (3/121) 4.42 0.000376 0.006109
GO:0008213 protein alkylation 2.48% (3/121) 4.42 0.000376 0.006109
GO:0018195 peptidyl-arginine modification 1.65% (2/121) 6.16 0.000335 0.006166
GO:0018216 peptidyl-arginine methylation 1.65% (2/121) 6.16 0.000335 0.006166
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.61% (8/121) 2.26 0.000285 0.006352
GO:0016462 pyrophosphatase activity 6.61% (8/121) 2.17 0.000428 0.006462
GO:0018193 peptidyl-amino acid modification 3.31% (4/121) 3.62 0.000327 0.006593
GO:0016817 hydrolase activity, acting on acid anhydrides 6.61% (8/121) 2.14 0.000499 0.006594
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.61% (8/121) 2.14 0.000486 0.006637
GO:0005488 binding 47.93% (58/121) 0.56 0.000317 0.006707
GO:0140142 nucleocytoplasmic carrier activity 1.65% (2/121) 5.57 0.000783 0.010038
GO:0006606 protein import into nucleus 1.65% (2/121) 5.46 0.000923 0.011159
GO:0034504 protein localization to nucleus 1.65% (2/121) 5.46 0.000923 0.011159
GO:0032561 guanyl ribonucleotide binding 4.13% (5/121) 2.69 0.001133 0.012608
GO:0005525 GTP binding 4.13% (5/121) 2.69 0.001133 0.012608
GO:0051170 import into nucleus 1.65% (2/121) 5.35 0.001075 0.012629
GO:0019899 enzyme binding 2.48% (3/121) 3.86 0.001177 0.012769
GO:0019001 guanyl nucleotide binding 4.13% (5/121) 2.65 0.001274 0.013477
GO:0007005 mitochondrion organization 1.65% (2/121) 4.99 0.001791 0.018474
GO:0051168 nuclear export 1.65% (2/121) 4.91 0.001997 0.020109
GO:0008094 ATP-dependent activity, acting on DNA 3.31% (4/121) 2.86 0.002354 0.023156
GO:0008276 protein methyltransferase activity 1.65% (2/121) 4.7 0.002679 0.025753
GO:0007008 outer mitochondrial membrane organization 0.83% (1/121) 8.16 0.003499 0.029599
GO:0031307 obsolete integral component of mitochondrial outer membrane 0.83% (1/121) 8.16 0.003499 0.029599
GO:0006408 snRNA export from nucleus 0.83% (1/121) 8.16 0.003499 0.029599
GO:0035246 peptidyl-arginine N-methylation 0.83% (1/121) 8.16 0.003499 0.029599
GO:0045040 protein insertion into mitochondrial outer membrane 0.83% (1/121) 8.16 0.003499 0.029599
GO:0140104 molecular carrier activity 1.65% (2/121) 4.46 0.003735 0.030975
GO:0035639 purine ribonucleoside triphosphate binding 14.88% (18/121) 0.99 0.004028 0.030981
GO:0022613 ribonucleoprotein complex biogenesis 1.65% (2/121) 4.4 0.004024 0.031523
GO:0003924 GTPase activity 3.31% (4/121) 2.65 0.003907 0.031782
GO:0003674 molecular_function 63.64% (77/121) 0.31 0.003998 0.031911
GO:0097159 organic cyclic compound binding 28.93% (35/121) 0.63 0.004228 0.031938
GO:0061024 membrane organization 1.65% (2/121) 4.52 0.003455 0.032479
GO:0000166 nucleotide binding 17.36% (21/121) 0.85 0.005454 0.039099
GO:1901265 nucleoside phosphate binding 17.36% (21/121) 0.85 0.005454 0.039099
GO:0008170 N-methyltransferase activity 1.65% (2/121) 4.2 0.005283 0.039204
GO:0071840 cellular component organization or biogenesis 6.61% (8/121) 1.57 0.005748 0.040521
GO:0090304 nucleic acid metabolic process 8.26% (10/121) 1.32 0.006989 0.042844
GO:0006425 glutaminyl-tRNA aminoacylation 0.83% (1/121) 7.16 0.006985 0.043453
GO:0000469 obsolete cleavage involved in rRNA processing 0.83% (1/121) 7.16 0.006985 0.043453
GO:0097064 ncRNA export from nucleus 0.83% (1/121) 7.16 0.006985 0.043453
GO:0005639 obsolete integral component of nuclear inner membrane 0.83% (1/121) 7.16 0.006985 0.043453
GO:0004819 glutamine-tRNA ligase activity 0.83% (1/121) 7.16 0.006985 0.043453
GO:0051030 snRNA transport 0.83% (1/121) 7.16 0.006985 0.043453
GO:0004046 aminoacylase activity 0.83% (1/121) 7.16 0.006985 0.043453
GO:0005737 cytoplasm 3.31% (4/121) 2.44 0.006457 0.044775
GO:0140097 catalytic activity, acting on DNA 3.31% (4/121) 2.36 0.007945 0.048012
GO:1901363 heterocyclic compound binding 17.36% (21/121) 0.8 0.008205 0.048881
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (121) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms