Coexpression cluster: Cluster_234 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071203 WASH complex 4.65% (2/43) 8.65 9e-06 0.003302
GO:0044281 small molecule metabolic process 16.28% (7/43) 2.74 7.5e-05 0.005461
GO:1902562 H4 histone acetyltransferase complex 4.65% (2/43) 7.33 6.8e-05 0.006161
GO:0043189 H4/H2A histone acetyltransferase complex 4.65% (2/43) 7.33 6.8e-05 0.006161
GO:0035267 NuA4 histone acetyltransferase complex 4.65% (2/43) 7.48 5.4e-05 0.009866
GO:0000123 histone acetyltransferase complex 4.65% (2/43) 5.9 0.00052 0.018967
GO:0031248 protein acetyltransferase complex 4.65% (2/43) 5.74 0.000642 0.019542
GO:1902493 acetyltransferase complex 4.65% (2/43) 5.74 0.000642 0.019542
GO:0006520 amino acid metabolic process 9.3% (4/43) 3.45 0.000493 0.019978
GO:0006082 organic acid metabolic process 11.63% (5/43) 2.94 0.000473 0.021584
GO:0016874 ligase activity 6.98% (3/43) 3.82 0.001268 0.023133
GO:0009142 nucleoside triphosphate biosynthetic process 4.65% (2/43) 5.26 0.00126 0.024199
GO:0009201 ribonucleoside triphosphate biosynthetic process 4.65% (2/43) 5.26 0.00126 0.024199
GO:0043436 oxoacid metabolic process 11.63% (5/43) 2.94 0.000469 0.024455
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 2.33% (1/43) 9.65 0.001243 0.026695
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 2.33% (1/43) 9.65 0.001243 0.026695
GO:0044237 cellular metabolic process 32.56% (14/43) 1.27 0.001097 0.026697
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 4.65% (2/43) 5.4 0.001032 0.0269
GO:0009145 purine nucleoside triphosphate biosynthetic process 4.65% (2/43) 5.4 0.001032 0.0269
GO:0019752 carboxylic acid metabolic process 11.63% (5/43) 2.95 0.000457 0.027796
GO:0043967 histone H4 acetylation 2.33% (1/43) 8.65 0.002485 0.036284
GO:0043968 histone H2A acetylation 2.33% (1/43) 8.65 0.002485 0.036284
GO:0031499 TRAMP complex 2.33% (1/43) 8.65 0.002485 0.036284
GO:0043874 acireductone synthase activity 2.33% (1/43) 8.65 0.002485 0.036284
GO:0003824 catalytic activity 46.51% (20/43) 0.83 0.003198 0.036474
GO:0004829 threonine-tRNA ligase activity 2.33% (1/43) 8.07 0.003726 0.036752
GO:0006435 threonyl-tRNA aminoacylation 2.33% (1/43) 8.07 0.003726 0.036752
GO:0032991 protein-containing complex 13.95% (6/43) 2.02 0.003336 0.036897
GO:0004812 aminoacyl-tRNA ligase activity 4.65% (2/43) 4.59 0.003172 0.037345
GO:0043038 amino acid activation 4.65% (2/43) 4.59 0.003172 0.037345
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.65% (2/43) 4.59 0.003172 0.037345
GO:0043039 tRNA aminoacylation 4.65% (2/43) 4.59 0.003172 0.037345
GO:0006418 tRNA aminoacylation for protein translation 4.65% (2/43) 4.59 0.003172 0.037345
GO:0009260 ribonucleotide biosynthetic process 4.65% (2/43) 4.48 0.003652 0.038088
GO:0046390 ribose phosphate biosynthetic process 4.65% (2/43) 4.48 0.003652 0.038088
GO:0044238 primary metabolic process 34.88% (15/43) 1.02 0.004062 0.03902
GO:0005737 cytoplasm 6.98% (3/43) 3.52 0.002277 0.039585
GO:0009152 purine ribonucleotide biosynthetic process 4.65% (2/43) 4.61 0.00308 0.043232
GO:0006164 purine nucleotide biosynthetic process 4.65% (2/43) 4.26 0.004934 0.046181
GO:0044249 cellular biosynthetic process 13.95% (6/43) 1.88 0.005327 0.048608
GO:0071704 organic substance metabolic process 34.88% (15/43) 0.9 0.008728 0.049775
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (43) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms