Coexpression cluster: Cluster_238 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 28.0% (14/50) 1.85 1.9e-05 0.006222
GO:0097159 organic cyclic compound binding 42.0% (21/50) 1.16 0.000122 0.020396
GO:0005488 binding 58.0% (29/50) 0.83 0.00019 0.021091
GO:0003674 molecular_function 76.0% (38/50) 0.57 0.000294 0.024464
GO:0101030 tRNA-guanine transglycosylation 2.0% (1/50) 9.43 0.001446 0.034388
GO:0006409 tRNA export from nucleus 2.0% (1/50) 9.43 0.001446 0.034388
GO:0071528 tRNA re-export from nucleus 2.0% (1/50) 9.43 0.001446 0.034388
GO:0051031 tRNA transport 2.0% (1/50) 9.43 0.001446 0.034388
GO:0004152 dihydroorotate dehydrogenase activity 2.0% (1/50) 9.43 0.001446 0.034388
GO:0006139 nucleobase-containing compound metabolic process 16.0% (8/50) 1.95 0.000962 0.035579
GO:0009451 RNA modification 6.0% (3/50) 3.65 0.001773 0.0369
GO:0046483 heterocycle metabolic process 16.0% (8/50) 1.82 0.001688 0.037478
GO:0016817 hydrolase activity, acting on acid anhydrides 10.0% (5/50) 2.74 0.000907 0.037749
GO:0140640 catalytic activity, acting on a nucleic acid 10.0% (5/50) 2.48 0.001971 0.038605
GO:0006725 cellular aromatic compound metabolic process 16.0% (8/50) 1.77 0.002089 0.03865
GO:0003924 GTPase activity 6.0% (3/50) 3.51 0.002343 0.039008
GO:0005634 nucleus 8.0% (4/50) 2.82 0.002504 0.039711
GO:1901360 organic cyclic compound metabolic process 16.0% (8/50) 1.75 0.002316 0.040593
GO:0017111 ribonucleoside triphosphate phosphatase activity 10.0% (5/50) 2.86 0.000621 0.041376
GO:0097064 ncRNA export from nucleus 2.0% (1/50) 8.43 0.002889 0.041834
GO:0008479 tRNA-guanosine(34) queuine transglycosylase activity 2.0% (1/50) 8.43 0.002889 0.041834
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.0% (5/50) 2.74 0.000891 0.042405
GO:0016462 pyrophosphatase activity 10.0% (5/50) 2.77 0.000817 0.04534
GO:0019001 guanyl nucleotide binding 6.0% (3/50) 3.19 0.004412 0.04739
GO:0003723 RNA binding 10.0% (5/50) 2.2 0.004583 0.047688
GO:0003824 catalytic activity 44.0% (22/50) 0.75 0.004744 0.047873
GO:0090116 C-5 methylation of cytosine 2.0% (1/50) 7.85 0.004331 0.048076
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins 2.0% (1/50) 7.85 0.004331 0.048076
GO:0032776 DNA methylation on cytosine 2.0% (1/50) 7.85 0.004331 0.048076
GO:0003886 DNA (cytosine-5-)-methyltransferase activity 2.0% (1/50) 7.85 0.004331 0.048076
GO:0009008 DNA-methyltransferase activity 2.0% (1/50) 7.85 0.004331 0.048076
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (50) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms