Coexpression cluster: Cluster_191 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043414 macromolecule methylation 7.27% (4/55) 4.92 1e-05 0.001198
GO:0001510 RNA methylation 5.45% (3/55) 5.79 2.2e-05 0.001374
GO:0032259 methylation 7.27% (4/55) 4.7 1.8e-05 0.001481
GO:0016070 RNA metabolic process 14.55% (8/55) 2.68 3.3e-05 0.001628
GO:0009451 RNA modification 9.09% (5/55) 4.25 7e-06 0.001668
GO:0005515 protein binding 32.73% (18/55) 1.41 6.4e-05 0.002675
GO:0003723 RNA binding 12.73% (7/55) 2.55 0.000186 0.005818
GO:0034641 cellular nitrogen compound metabolic process 20.0% (11/55) 1.86 0.000174 0.006221
GO:0005488 binding 56.36% (31/55) 0.79 0.000237 0.006571
GO:0005525 GTP binding 7.27% (4/55) 3.5 0.000436 0.009085
GO:0032561 guanyl ribonucleotide binding 7.27% (4/55) 3.5 0.000436 0.009085
GO:0019001 guanyl nucleotide binding 7.27% (4/55) 3.46 0.000482 0.009271
GO:0090304 nucleic acid metabolic process 14.55% (8/55) 2.14 0.000429 0.010713
GO:0046483 heterocycle metabolic process 16.36% (9/55) 1.86 0.000746 0.013329
GO:1901360 organic cyclic compound metabolic process 16.36% (9/55) 1.78 0.001067 0.014816
GO:0000003 reproduction 3.64% (2/55) 5.39 0.00105 0.015438
GO:0019953 sexual reproduction 3.64% (2/55) 5.39 0.00105 0.015438
GO:0006725 cellular aromatic compound metabolic process 16.36% (9/55) 1.81 0.000949 0.015824
GO:0006401 RNA catabolic process 3.64% (2/55) 4.97 0.001863 0.023291
GO:0006139 nucleobase-containing compound metabolic process 14.55% (8/55) 1.81 0.001818 0.023919
GO:0009019 obsolete tRNA (guanine-N1-)-methyltransferase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:0016428 tRNA (cytidine-5-)-methyltransferase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:0004349 glutamate 5-kinase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:0036265 RNA (guanine-N7)-methylation 1.82% (1/55) 8.3 0.003178 0.029428
GO:0004350 glutamate-5-semialdehyde dehydrogenase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:0004654 polyribonucleotide nucleotidyltransferase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:0016427 tRNA (cytidine) methyltransferase activity 1.82% (1/55) 8.3 0.003178 0.029428
GO:1901671 positive regulation of superoxide dismutase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0004823 leucine-tRNA ligase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0006429 leucyl-tRNA aminoacylation 1.82% (1/55) 7.71 0.004764 0.03308
GO:0004156 dihydropteroate synthase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:1901668 regulation of superoxide dismutase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0051341 regulation of oxidoreductase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0051353 positive regulation of oxidoreductase activity 1.82% (1/55) 7.71 0.004764 0.03308
GO:0006561 proline biosynthetic process 1.82% (1/55) 7.71 0.004764 0.03308
GO:0034660 ncRNA metabolic process 5.45% (3/55) 3.13 0.004964 0.033539
GO:0006560 proline metabolic process 1.82% (1/55) 7.3 0.006346 0.041753
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (55) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms