Coexpression cluster: Cluster_82 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 13.5% (22/163) 2.03 0.0 7e-06
GO:0016887 ATP hydrolysis activity 7.36% (12/163) 3.11 0.0 1e-05
GO:0097159 organic cyclic compound binding 36.2% (59/163) 0.95 0.0 1.3e-05
GO:0046483 heterocycle metabolic process 15.34% (25/163) 1.76 0.0 1.3e-05
GO:0006139 nucleobase-containing compound metabolic process 14.72% (24/163) 1.83 0.0 1.4e-05
GO:0006457 protein folding 4.91% (8/163) 3.77 0.0 1.4e-05
GO:0006725 cellular aromatic compound metabolic process 15.34% (25/163) 1.71 0.0 1.4e-05
GO:1901360 organic cyclic compound metabolic process 15.34% (25/163) 1.69 0.0 1.7e-05
GO:0005488 binding 51.53% (84/163) 0.66 0.0 2.7e-05
GO:0017111 ribonucleoside triphosphate phosphatase activity 7.98% (13/163) 2.53 0.0 2.8e-05
GO:0003723 RNA binding 9.82% (16/163) 2.17 1e-06 3.3e-05
GO:0016071 mRNA metabolic process 4.91% (8/163) 3.45 1e-06 3.8e-05
GO:0006396 RNA processing 6.75% (11/163) 2.69 1e-06 4e-05
GO:0016817 hydrolase activity, acting on acid anhydrides 7.98% (13/163) 2.41 1e-06 4.2e-05
GO:0016070 RNA metabolic process 9.82% (16/163) 2.11 1e-06 4.2e-05
GO:0034641 cellular nitrogen compound metabolic process 15.95% (26/163) 1.53 1e-06 4.2e-05
GO:0000398 mRNA splicing, via spliceosome 3.68% (6/163) 4.12 1e-06 4.2e-05
GO:0016462 pyrophosphatase activity 7.98% (13/163) 2.44 1e-06 4.2e-05
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.98% (13/163) 2.42 1e-06 4.3e-05
GO:0009987 cellular process 36.81% (60/163) 0.83 2e-06 4.9e-05
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.68% (6/163) 3.97 2e-06 6.7e-05
GO:0003676 nucleic acid binding 19.02% (31/163) 1.29 3e-06 7.9e-05
GO:0000375 RNA splicing, via transesterification reactions 3.68% (6/163) 3.9 3e-06 8.1e-05
GO:0008380 RNA splicing 3.68% (6/163) 3.7 7e-06 0.000177
GO:0005524 ATP binding 16.56% (27/163) 1.27 1.8e-05 0.000421
GO:0035639 purine ribonucleoside triphosphate binding 17.18% (28/163) 1.19 3.2e-05 0.000683
GO:0006397 mRNA processing 3.68% (6/163) 3.34 3.1e-05 0.000687
GO:0006260 DNA replication 3.07% (5/163) 3.62 5.6e-05 0.001157
GO:0036094 small molecule binding 20.25% (33/163) 1.01 7e-05 0.001407
GO:1901363 heterocyclic compound binding 19.63% (32/163) 0.98 0.000142 0.002732
GO:0043168 anion binding 19.02% (31/163) 0.98 0.000194 0.003512
GO:0005681 spliceosomal complex 1.84% (3/163) 4.73 0.000193 0.003613
GO:0097367 carbohydrate derivative binding 17.79% (29/163) 1.01 0.000225 0.003947
GO:0030554 adenyl nucleotide binding 17.18% (28/163) 1.02 0.00024 0.004081
GO:0005739 mitochondrion 1.84% (3/163) 4.61 0.000247 0.004082
GO:0032559 adenyl ribonucleotide binding 16.56% (27/163) 1.04 0.000255 0.004105
GO:0004364 glutathione transferase activity 2.45% (4/163) 3.68 0.000273 0.004272
GO:0017076 purine nucleotide binding 17.79% (29/163) 0.97 0.000353 0.005382
GO:0032555 purine ribonucleotide binding 17.18% (28/163) 0.99 0.00037 0.005487
GO:0003674 molecular_function 64.42% (105/163) 0.33 0.000462 0.006223
GO:0051087 protein-folding chaperone binding 1.84% (3/163) 4.31 0.000461 0.006356
GO:0071826 protein-RNA complex organization 1.84% (3/163) 4.31 0.000461 0.006356
GO:0032553 ribonucleotide binding 17.18% (28/163) 0.97 0.000452 0.006542
GO:1901265 nucleoside phosphate binding 17.79% (29/163) 0.89 0.000833 0.010723
GO:0000166 nucleotide binding 17.79% (29/163) 0.89 0.000833 0.010723
GO:0043167 ion binding 24.54% (40/163) 0.71 0.000887 0.011169
GO:0051879 Hsp90 protein binding 1.23% (2/163) 5.41 0.000969 0.011939
GO:0008150 biological_process 46.01% (75/163) 0.43 0.001192 0.014082
GO:0030544 Hsp70 protein binding 1.23% (2/163) 5.27 0.001181 0.014244
GO:0000387 spliceosomal snRNP assembly 1.23% (2/163) 5.14 0.001413 0.016358
GO:0006749 glutathione metabolic process 2.45% (4/163) 2.99 0.001683 0.019113
GO:0140513 nuclear protein-containing complex 3.68% (6/163) 2.25 0.001731 0.019278
GO:0005694 chromosome 1.23% (2/163) 4.92 0.001936 0.020755
GO:0005102 signaling receptor binding 1.23% (2/163) 4.92 0.001936 0.020755
GO:0044270 cellular nitrogen compound catabolic process 2.45% (4/163) 2.87 0.002261 0.023799
GO:0046700 heterocycle catabolic process 2.45% (4/163) 2.86 0.002332 0.024114
GO:0006807 nitrogen compound metabolic process 22.7% (37/163) 0.66 0.002686 0.027289
GO:0140640 catalytic activity, acting on a nucleic acid 5.52% (9/163) 1.63 0.002789 0.02784
GO:0007005 mitochondrion organization 1.23% (2/163) 4.56 0.003215 0.03102
GO:0051082 unfolded protein binding 1.84% (3/163) 3.36 0.003171 0.031115
GO:0044237 cellular metabolic process 21.47% (35/163) 0.67 0.003374 0.032024
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.45% (4/163) 2.68 0.0036 0.033619
GO:0008152 metabolic process 28.83% (47/163) 0.54 0.003807 0.034992
GO:0140657 ATP-dependent activity 4.91% (8/163) 1.63 0.004726 0.035534
GO:0043170 macromolecule metabolic process 20.25% (33/163) 0.66 0.004716 0.035929
GO:0003824 catalytic activity 35.58% (58/163) 0.44 0.004897 0.036352
GO:0030623 U5 snRNA binding 0.61% (1/163) 7.73 0.004713 0.036386
GO:0032963 collagen metabolic process 0.61% (1/163) 7.73 0.004713 0.036386
GO:0004174 electron-transferring-flavoprotein dehydrogenase activity 0.61% (1/163) 7.73 0.004713 0.036386
GO:0033612 receptor serine/threonine kinase binding 0.61% (1/163) 7.73 0.004713 0.036386
GO:0044548 S100 protein binding 0.61% (1/163) 7.73 0.004713 0.036386
GO:0000408 EKC/KEOPS complex 0.61% (1/163) 7.73 0.004713 0.036386
GO:0043625 delta DNA polymerase complex 0.61% (1/163) 7.73 0.004713 0.036386
GO:0043139 5'-3' DNA helicase activity 0.61% (1/163) 7.73 0.004713 0.036386
GO:0017070 U6 snRNA binding 0.61% (1/163) 7.73 0.004713 0.036386
GO:0000380 alternative mRNA splicing, via spliceosome 0.61% (1/163) 7.73 0.004713 0.036386
GO:0004070 aspartate carbamoyltransferase activity 0.61% (1/163) 7.73 0.004713 0.036386
GO:0005515 protein binding 19.63% (32/163) 0.67 0.005042 0.036951
GO:0140097 catalytic activity, acting on DNA 3.07% (5/163) 2.25 0.004216 0.038145
GO:0016043 cellular component organization 5.52% (9/163) 1.47 0.005529 0.040018
GO:0031072 heat shock protein binding 1.23% (2/163) 4.14 0.005692 0.04069
GO:0008094 ATP-dependent activity, acting on DNA 2.45% (4/163) 2.43 0.006779 0.047864
GO:0019439 aromatic compound catabolic process 2.45% (4/163) 2.4 0.007235 0.049282
GO:0003697 single-stranded DNA binding 1.23% (2/163) 3.97 0.007173 0.049439
GO:0022618 protein-RNA complex assembly 1.23% (2/163) 3.97 0.007173 0.049439
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (163) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms