Coexpression cluster: Cluster_30 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 20.35% (46/226) 4.31 0.0 0.0
GO:0005840 ribosome 19.47% (44/226) 4.36 0.0 0.0
GO:0006412 translation 19.47% (44/226) 4.26 0.0 0.0
GO:0005198 structural molecule activity 20.35% (46/226) 4.11 0.0 0.0
GO:0043043 peptide biosynthetic process 19.47% (44/226) 4.22 0.0 0.0
GO:0006518 peptide metabolic process 19.47% (44/226) 4.14 0.0 0.0
GO:0043604 amide biosynthetic process 19.47% (44/226) 4.12 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 23.89% (54/226) 3.51 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 19.47% (44/226) 3.98 0.0 0.0
GO:0043228 non-membrane-bounded organelle 19.47% (44/226) 3.98 0.0 0.0
GO:0043603 amide metabolic process 19.47% (44/226) 3.97 0.0 0.0
GO:0009059 macromolecule biosynthetic process 21.68% (49/226) 3.47 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 23.01% (52/226) 3.25 0.0 0.0
GO:0044249 cellular biosynthetic process 26.11% (59/226) 2.79 0.0 0.0
GO:1901576 organic substance biosynthetic process 26.55% (60/226) 2.71 0.0 0.0
GO:0009058 biosynthetic process 26.99% (61/226) 2.61 0.0 0.0
GO:0043229 intracellular organelle 21.68% (49/226) 2.97 0.0 0.0
GO:0043226 organelle 21.68% (49/226) 2.97 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 26.55% (60/226) 2.27 0.0 0.0
GO:0044237 cellular metabolic process 37.17% (84/226) 1.46 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 31.86% (72/226) 1.53 0.0 0.0
GO:0006807 nitrogen compound metabolic process 35.84% (81/226) 1.32 0.0 0.0
GO:0044391 ribosomal subunit 5.75% (13/226) 4.62 0.0 0.0
GO:0009987 cellular process 43.36% (98/226) 1.06 0.0 0.0
GO:0019538 protein metabolic process 26.55% (60/226) 1.55 0.0 0.0
GO:0043170 macromolecule metabolic process 31.86% (72/226) 1.32 0.0 0.0
GO:0110165 cellular anatomical entity 23.45% (53/226) 1.62 0.0 0.0
GO:0008152 metabolic process 41.15% (93/226) 1.05 0.0 0.0
GO:0071704 organic substance metabolic process 39.38% (89/226) 1.08 0.0 0.0
GO:0005575 cellular_component 27.43% (62/226) 1.4 0.0 0.0
GO:1990904 ribonucleoprotein complex 6.19% (14/226) 3.53 0.0 0.0
GO:0044238 primary metabolic process 35.4% (80/226) 1.04 0.0 0.0
GO:0015935 small ribosomal subunit 3.1% (7/226) 5.16 0.0 0.0
GO:0008150 biological_process 51.77% (117/226) 0.6 0.0 1e-06
GO:0003674 molecular_function 67.26% (152/226) 0.39 1e-06 1.3e-05
GO:0015934 large ribosomal subunit 2.65% (6/226) 4.17 1e-06 1.7e-05
GO:0006457 protein folding 3.1% (7/226) 3.11 1.8e-05 0.000292
GO:0019843 rRNA binding 1.77% (4/226) 4.21 6.3e-05 0.000975
GO:0051353 positive regulation of oxidoreductase activity 0.88% (2/226) 6.67 0.000127 0.001748
GO:1901668 regulation of superoxide dismutase activity 0.88% (2/226) 6.67 0.000127 0.001748
GO:1901671 positive regulation of superoxide dismutase activity 0.88% (2/226) 6.67 0.000127 0.001748
GO:0051341 regulation of oxidoreductase activity 0.88% (2/226) 6.67 0.000127 0.001748
GO:0032991 protein-containing complex 8.85% (20/226) 1.37 0.000116 0.001763
GO:0002182 cytoplasmic translational elongation 0.88% (2/226) 5.94 0.00042 0.005647
GO:0003723 RNA binding 6.19% (14/226) 1.51 0.000483 0.006356
GO:1901615 organic hydroxy compound metabolic process 1.77% (4/226) 3.26 0.00083 0.010681
GO:0019238 cyclohydrolase activity 0.88% (2/226) 5.45 0.000874 0.011005
GO:0006526 arginine biosynthetic process 0.88% (2/226) 4.8 0.002249 0.027741
GO:0072528 pyrimidine-containing compound biosynthetic process 1.33% (3/226) 3.35 0.003192 0.038564
GO:0006525 arginine metabolic process 0.88% (2/226) 4.45 0.003674 0.041035
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.88% (2/226) 4.45 0.003674 0.041035
GO:0006066 alcohol metabolic process 1.33% (3/226) 3.29 0.003613 0.041936
GO:0072527 pyrimidine-containing compound metabolic process 1.33% (3/226) 3.29 0.003613 0.041936
GO:0044281 small molecule metabolic process 5.75% (13/226) 1.24 0.003873 0.04246
GO:0140694 non-membrane-bounded organelle assembly 0.88% (2/226) 4.35 0.004221 0.04543
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (226) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms