Coexpression cluster: Cluster_28 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 13.21% (14/106) 2.6 0.0 3.5e-05
GO:0034641 cellular nitrogen compound metabolic process 18.87% (20/106) 1.78 1e-06 0.000262
GO:0016070 RNA metabolic process 11.32% (12/106) 2.32 5e-06 0.000783
GO:0006139 nucleobase-containing compound metabolic process 14.15% (15/106) 1.77 3.1e-05 0.003367
GO:0001522 pseudouridine synthesis 2.83% (3/106) 5.29 6.1e-05 0.003764
GO:0008250 oligosaccharyltransferase complex 1.89% (2/106) 7.35 5.6e-05 0.003986
GO:0090304 nucleic acid metabolic process 12.26% (13/106) 1.89 4.9e-05 0.004214
GO:0046483 heterocycle metabolic process 14.15% (15/106) 1.65 8.5e-05 0.00456
GO:0006396 RNA processing 6.6% (7/106) 2.66 0.00013 0.005604
GO:1901360 organic cyclic compound metabolic process 14.15% (15/106) 1.57 0.000148 0.005785
GO:0006725 cellular aromatic compound metabolic process 14.15% (15/106) 1.6 0.000123 0.005899
GO:0003676 nucleic acid binding 18.87% (20/106) 1.28 0.00018 0.006444
GO:0043170 macromolecule metabolic process 25.47% (27/106) 1.0 0.000292 0.009664
GO:0006807 nitrogen compound metabolic process 27.36% (29/106) 0.93 0.000342 0.010514
GO:0034660 ncRNA metabolic process 4.72% (5/106) 2.92 0.000551 0.015803
GO:0006399 tRNA metabolic process 3.77% (4/106) 3.32 0.000725 0.019472
GO:0008033 tRNA processing 2.83% (3/106) 3.93 0.001018 0.024315
GO:0031267 small GTPase binding 1.89% (2/106) 5.26 0.001228 0.025147
GO:0051020 GTPase binding 1.89% (2/106) 5.26 0.001228 0.025147
GO:0034470 ncRNA processing 3.77% (4/106) 3.19 0.001004 0.025402
GO:1990234 transferase complex 3.77% (4/106) 3.12 0.001198 0.027123
GO:0009451 RNA modification 3.77% (4/106) 2.98 0.001701 0.031793
GO:0005198 structural molecule activity 5.66% (6/106) 2.26 0.001645 0.032152
GO:0030515 snoRNA binding 1.89% (2/106) 4.96 0.001881 0.032358
GO:0042254 ribosome biogenesis 1.89% (2/106) 4.96 0.001881 0.032358
GO:0044238 primary metabolic process 28.3% (30/106) 0.72 0.003122 0.044755
GO:0003674 molecular_function 65.09% (69/106) 0.34 0.002751 0.045494
GO:0022613 ribonucleoprotein complex biogenesis 1.89% (2/106) 4.6 0.003107 0.046069
GO:0042800 histone H3K4 methyltransferase activity 0.94% (1/106) 8.35 0.003065 0.04707
GO:0034998 oligosaccharyltransferase I complex 0.94% (1/106) 8.35 0.003065 0.04707
GO:0005840 ribosome 4.72% (5/106) 2.32 0.003411 0.04731
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (106) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms