Coexpression cluster: Cluster_110 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043604 amide biosynthetic process 25.0% (14/56) 4.48 0.0 0.0
GO:0043603 amide metabolic process 25.0% (14/56) 4.33 0.0 0.0
GO:0003735 structural constituent of ribosome 23.21% (13/56) 4.5 0.0 0.0
GO:0043043 peptide biosynthetic process 23.21% (13/56) 4.47 0.0 0.0
GO:0006412 translation 23.21% (13/56) 4.51 0.0 0.0
GO:0006518 peptide metabolic process 23.21% (13/56) 4.39 0.0 0.0
GO:0005198 structural molecule activity 23.21% (13/56) 4.3 0.0 0.0
GO:0005840 ribosome 21.43% (12/56) 4.5 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 23.21% (13/56) 4.23 0.0 0.0
GO:0043228 non-membrane-bounded organelle 23.21% (13/56) 4.23 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 25.0% (14/56) 3.58 0.0 0.0
GO:0009059 macromolecule biosynthetic process 23.21% (13/56) 3.57 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 25.0% (14/56) 3.37 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 32.14% (18/56) 2.54 0.0 0.0
GO:0043229 intracellular organelle 23.21% (13/56) 3.07 0.0 0.0
GO:0043226 organelle 23.21% (13/56) 3.07 0.0 0.0
GO:0009058 biosynthetic process 26.79% (15/56) 2.6 0.0 0.0
GO:0044249 cellular biosynthetic process 25.0% (14/56) 2.72 0.0 0.0
GO:1901576 organic substance biosynthetic process 25.0% (14/56) 2.62 0.0 0.0
GO:0005575 cellular_component 35.71% (20/56) 1.78 0.0 5e-06
GO:0110165 cellular anatomical entity 30.36% (17/56) 1.99 1e-06 6e-06
GO:0044391 ribosomal subunit 7.14% (4/56) 4.93 9e-06 0.0001
GO:1990904 ribonucleoprotein complex 8.93% (5/56) 4.05 1.3e-05 0.000134
GO:0044237 cellular metabolic process 33.93% (19/56) 1.33 8.2e-05 0.000805
GO:0090079 translation regulator activity, nucleic acid binding 5.36% (3/56) 4.38 0.000414 0.003616
GO:0008135 translation factor activity, RNA binding 5.36% (3/56) 4.38 0.000414 0.003616
GO:0005852 eukaryotic translation initiation factor 3 complex 3.57% (2/56) 6.1 0.000388 0.003658
GO:0043170 macromolecule metabolic process 30.36% (17/56) 1.25 0.000435 0.003666
GO:0045182 translation regulator activity 5.36% (3/56) 4.3 0.000486 0.003952
GO:0006807 nitrogen compound metabolic process 32.14% (18/56) 1.17 0.000565 0.004443
GO:0032991 protein-containing complex 14.29% (8/56) 2.06 0.000622 0.004737
GO:1901564 organonitrogen compound metabolic process 26.79% (15/56) 1.27 0.000869 0.006409
GO:0015935 small ribosomal subunit 3.57% (2/56) 5.36 0.001088 0.007781
GO:0009987 cellular process 39.29% (22/56) 0.92 0.001178 0.008177
GO:0019538 protein metabolic process 23.21% (13/56) 1.36 0.001231 0.008302
GO:0003743 translation initiation factor activity 3.57% (2/56) 4.6 0.00312 0.019903
GO:0015934 large ribosomal subunit 3.57% (2/56) 4.6 0.00312 0.019903
GO:0008152 metabolic process 35.71% (20/56) 0.85 0.004163 0.025852
GO:0004827 proline-tRNA ligase activity 1.79% (1/56) 7.69 0.00485 0.027252
GO:0006433 prolyl-tRNA aminoacylation 1.79% (1/56) 7.69 0.00485 0.027252
GO:0005737 cytoplasm 5.36% (3/56) 3.14 0.004829 0.028489
GO:0034660 ncRNA metabolic process 5.36% (3/56) 3.1 0.005221 0.028654
GO:0044238 primary metabolic process 32.14% (18/56) 0.9 0.004751 0.028752
GO:0006364 rRNA processing 3.57% (2/56) 4.02 0.006797 0.036457
GO:0003723 RNA binding 8.93% (5/56) 2.03 0.007428 0.038955
GO:0045254 pyruvate dehydrogenase complex 1.79% (1/56) 6.95 0.008071 0.040524
GO:0016072 rRNA metabolic process 3.57% (2/56) 3.9 0.008057 0.041338
GO:0016070 RNA metabolic process 8.93% (5/56) 1.97 0.0088 0.043265
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.79% (1/56) 6.69 0.009677 0.046607
GO:0003676 nucleic acid binding 17.86% (10/56) 1.2 0.010505 0.049585
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (56) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms