Coexpression cluster: Cluster_234 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006325 chromatin organization 4.32% (7/162) 4.4 0.0 2.3e-05
GO:0071824 protein-DNA complex organization 4.32% (7/162) 4.15 0.0 3.8e-05
GO:0042162 telomeric DNA binding 1.85% (3/162) 5.98 1.2e-05 0.001288
GO:0043933 protein-containing complex organization 4.94% (8/162) 2.92 1.2e-05 0.001548
GO:0006338 chromatin remodeling 3.09% (5/162) 4.11 1.1e-05 0.001899
GO:0016043 cellular component organization 7.41% (12/162) 2.07 3.4e-05 0.002947
GO:0000781 chromosome, telomeric region 1.23% (2/162) 7.13 6.7e-05 0.003509
GO:0043047 single-stranded telomeric DNA binding 1.23% (2/162) 7.13 6.7e-05 0.003509
GO:0098847 sequence-specific single stranded DNA binding 1.23% (2/162) 7.13 6.7e-05 0.003509
GO:0003676 nucleic acid binding 17.9% (29/162) 1.13 5e-05 0.00373
GO:0071840 cellular component organization or biogenesis 7.41% (12/162) 1.89 0.000107 0.005105
GO:0019887 protein kinase regulator activity 1.85% (3/162) 4.84 0.000151 0.006606
GO:0003723 RNA binding 7.41% (12/162) 1.8 0.000191 0.007705
GO:0006397 mRNA processing 3.09% (5/162) 3.12 0.000289 0.010817
GO:0090304 nucleic acid metabolic process 8.64% (14/162) 1.55 0.00033 0.010821
GO:0019207 kinase regulator activity 1.85% (3/162) 4.5 0.000315 0.01101
GO:0046483 heterocycle metabolic process 10.49% (17/162) 1.35 0.00039 0.012025
GO:0098687 chromosomal region 1.23% (2/162) 5.91 0.000463 0.013477
GO:0005634 nucleus 4.94% (8/162) 2.09 0.000631 0.017389
GO:0000723 telomere maintenance 1.23% (2/162) 5.55 0.000789 0.017968
GO:0032200 telomere organization 1.23% (2/162) 5.55 0.000789 0.017968
GO:0016071 mRNA metabolic process 3.09% (5/162) 2.83 0.000725 0.018096
GO:1901360 organic cyclic compound metabolic process 10.49% (17/162) 1.27 0.000705 0.018461
GO:0009987 cellular process 29.63% (48/162) 0.61 0.00114 0.023898
GO:0006139 nucleobase-containing compound metabolic process 9.26% (15/162) 1.3 0.001198 0.024141
GO:0140535 intracellular protein-containing complex 3.09% (5/162) 2.69 0.001117 0.024394
GO:0140513 nuclear protein-containing complex 3.7% (6/162) 2.34 0.001285 0.024945
GO:0006396 RNA processing 4.32% (7/162) 2.07 0.0015 0.026193
GO:0006725 cellular aromatic compound metabolic process 9.88% (16/162) 1.23 0.001418 0.026543
GO:0034641 cellular nitrogen compound metabolic process 11.11% (18/162) 1.13 0.001478 0.026701
GO:0097525 spliceosomal snRNP complex 1.23% (2/162) 5.02 0.001688 0.028526
GO:0005488 binding 42.59% (69/162) 0.44 0.001754 0.028716
GO:0044237 cellular metabolic process 20.37% (33/162) 0.73 0.00229 0.034284
GO:0032991 protein-containing complex 8.02% (13/162) 1.32 0.002358 0.034327
GO:0120114 Sm-like protein family complex 1.23% (2/162) 4.81 0.002258 0.034795
GO:0030532 small nuclear ribonucleoprotein complex 1.23% (2/162) 4.81 0.002258 0.034795
GO:0016570 histone modification 1.85% (3/162) 3.47 0.002546 0.03605
GO:0043968 histone H2A acetylation 0.62% (1/162) 7.72 0.004747 0.044415
GO:0031932 TORC2 complex 0.62% (1/162) 7.72 0.004747 0.044415
GO:0030904 retromer complex 0.62% (1/162) 7.72 0.004747 0.044415
GO:0042761 very long-chain fatty acid biosynthetic process 0.62% (1/162) 7.72 0.004747 0.044415
GO:0004484 mRNA guanylyltransferase activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0043967 histone H4 acetylation 0.62% (1/162) 7.72 0.004747 0.044415
GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0004651 polynucleotide 5'-phosphatase activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0000038 very long-chain fatty acid metabolic process 0.62% (1/162) 7.72 0.004747 0.044415
GO:0004789 thiamine-phosphate diphosphorylase activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0044599 AP-5 adaptor complex 0.62% (1/162) 7.72 0.004747 0.044415
GO:0008972 phosphomethylpyrimidine kinase activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0045145 single-stranded DNA 5'-3' DNA exonuclease activity 0.62% (1/162) 7.72 0.004747 0.044415
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 1.23% (2/162) 4.55 0.003259 0.044942
GO:0000398 mRNA splicing, via spliceosome 1.85% (3/162) 3.13 0.004926 0.045289
GO:1990234 transferase complex 2.47% (4/162) 2.71 0.0034 0.04568
GO:0043227 membrane-bounded organelle 4.94% (8/162) 1.68 0.003736 0.04775
GO:0043231 intracellular membrane-bounded organelle 4.94% (8/162) 1.68 0.003736 0.04775
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (162) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms