Coexpression cluster: Cluster_36 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043228 non-membrane-bounded organelle 9.78% (18/184) 3.04 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 9.78% (18/184) 3.04 0.0 0.0
GO:0015979 photosynthesis 4.89% (9/184) 4.87 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 13.04% (24/184) 2.51 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 11.41% (21/184) 2.52 0.0 0.0
GO:0044249 cellular biosynthetic process 14.67% (27/184) 2.03 0.0 0.0
GO:0043043 peptide biosynthetic process 8.15% (15/184) 3.05 0.0 0.0
GO:0006518 peptide metabolic process 8.15% (15/184) 2.97 0.0 0.0
GO:0005840 ribosome 7.61% (14/184) 3.08 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.26% (6/184) 5.66 0.0 0.0
GO:0043604 amide biosynthetic process 8.15% (15/184) 2.93 0.0 0.0
GO:0006412 translation 7.61% (14/184) 2.98 0.0 0.0
GO:1901576 organic substance biosynthetic process 14.67% (27/184) 1.91 0.0 0.0
GO:0043603 amide metabolic process 8.15% (15/184) 2.78 0.0 0.0
GO:1990204 oxidoreductase complex 3.8% (7/184) 4.59 0.0 1e-06
GO:0009058 biosynthetic process 14.67% (27/184) 1.78 0.0 1e-06
GO:0009521 photosystem 3.8% (7/184) 4.54 0.0 1e-06
GO:0019898 extrinsic component of membrane 2.72% (5/184) 5.69 0.0 1e-06
GO:0003735 structural constituent of ribosome 7.07% (13/184) 2.83 0.0 1e-06
GO:0009523 photosystem II 3.26% (6/184) 4.87 0.0 1e-06
GO:0009059 macromolecule biosynthetic process 9.24% (17/184) 2.32 0.0 2e-06
GO:0044237 cellular metabolic process 26.63% (49/184) 1.12 0.0 2e-06
GO:0005198 structural molecule activity 7.07% (13/184) 2.62 0.0 6e-06
GO:0110165 cellular anatomical entity 19.02% (35/184) 1.33 0.0 8e-06
GO:0051537 2 iron, 2 sulfur cluster binding 2.72% (5/184) 4.73 1e-06 2.6e-05
GO:0008152 metabolic process 33.15% (61/184) 0.84 2e-06 3.4e-05
GO:0034641 cellular nitrogen compound metabolic process 14.13% (26/184) 1.48 2e-06 4.4e-05
GO:0006091 generation of precursor metabolites and energy 4.35% (8/184) 3.22 3e-06 4.8e-05
GO:0005575 cellular_component 21.74% (40/184) 1.1 3e-06 4.8e-05
GO:0043229 intracellular organelle 9.78% (18/184) 1.85 3e-06 5.5e-05
GO:0043226 organelle 9.78% (18/184) 1.85 3e-06 5.5e-05
GO:0051536 iron-sulfur cluster binding 3.26% (6/184) 3.82 5e-06 7.3e-05
GO:0051540 metal cluster binding 3.26% (6/184) 3.82 5e-06 7.3e-05
GO:0046034 ATP metabolic process 3.26% (6/184) 3.76 6e-06 8.9e-05
GO:0009987 cellular process 33.15% (61/184) 0.77 7e-06 0.000106
GO:0006754 ATP biosynthetic process 2.17% (4/184) 4.95 8e-06 0.000115
GO:0015986 proton motive force-driven ATP synthesis 2.17% (4/184) 4.95 8e-06 0.000115
GO:0009144 purine nucleoside triphosphate metabolic process 3.26% (6/184) 3.66 8e-06 0.000116
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.26% (6/184) 3.66 8e-06 0.000116
GO:0009199 ribonucleoside triphosphate metabolic process 3.26% (6/184) 3.58 1.2e-05 0.000156
GO:0098796 membrane protein complex 4.89% (9/184) 2.69 1.2e-05 0.000158
GO:0009141 nucleoside triphosphate metabolic process 3.26% (6/184) 3.52 1.5e-05 0.000189
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.17% (4/184) 4.63 2e-05 0.000244
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.17% (4/184) 4.63 2e-05 0.000244
GO:0009579 thylakoid 1.63% (3/184) 5.66 2.5e-05 0.000292
GO:0009142 nucleoside triphosphate biosynthetic process 2.17% (4/184) 4.41 3.8e-05 0.000427
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.17% (4/184) 4.41 3.8e-05 0.000427
GO:0015252 proton channel activity 1.63% (3/184) 5.31 5.4e-05 0.000585
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.63% (3/184) 5.31 5.4e-05 0.000585
GO:0009150 purine ribonucleotide metabolic process 3.26% (6/184) 3.05 9.2e-05 0.00098
GO:0009259 ribonucleotide metabolic process 3.26% (6/184) 2.98 0.000121 0.001271
GO:0019693 ribose phosphate metabolic process 3.26% (6/184) 2.94 0.000142 0.001453
GO:0015976 carbon utilization 1.09% (2/184) 6.21 0.000286 0.002882
GO:0016491 oxidoreductase activity 10.87% (20/184) 1.26 0.000292 0.002886
GO:0022900 electron transport chain 2.17% (4/184) 3.63 0.000315 0.003058
GO:0009152 purine ribonucleotide biosynthetic process 2.17% (4/184) 3.6 0.000336 0.003091
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.63% (3/184) 4.48 0.000325 0.003098
GO:0006163 purine nucleotide metabolic process 3.26% (6/184) 2.71 0.000334 0.00313
GO:0004332 fructose-bisphosphate aldolase activity 1.09% (2/184) 5.95 0.000428 0.003805
GO:0010277 chlorophyllide a oxygenase [overall] activity 1.09% (2/184) 5.95 0.000428 0.003805
GO:0009260 ribonucleotide biosynthetic process 2.17% (4/184) 3.45 0.000509 0.004312
GO:0046390 ribose phosphate biosynthetic process 2.17% (4/184) 3.45 0.000509 0.004312
GO:0072521 purine-containing compound metabolic process 3.26% (6/184) 2.6 0.000494 0.004325
GO:0018130 heterocycle biosynthetic process 4.89% (9/184) 1.97 0.000551 0.004599
GO:0009117 nucleotide metabolic process 3.26% (6/184) 2.51 0.000708 0.005817
GO:0006753 nucleoside phosphate metabolic process 3.26% (6/184) 2.48 0.000766 0.0062
GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) 1.09% (2/184) 5.54 0.000792 0.006315
GO:0009416 response to light stimulus 1.63% (3/184) 4.03 0.000816 0.006406
GO:0006164 purine nucleotide biosynthetic process 2.17% (4/184) 3.23 0.000896 0.006838
GO:0009314 response to radiation 1.63% (3/184) 3.99 0.000889 0.006877
GO:0016830 carbon-carbon lyase activity 2.17% (4/184) 3.2 0.000984 0.007403
GO:0016832 aldehyde-lyase activity 1.09% (2/184) 5.37 0.001015 0.007426
GO:0010038 response to metal ion 1.09% (2/184) 5.37 0.001015 0.007426
GO:1901362 organic cyclic compound biosynthetic process 4.89% (9/184) 1.83 0.001067 0.007697
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.8% (7/184) 2.15 0.001089 0.007752
GO:0015078 proton transmembrane transporter activity 2.17% (4/184) 3.04 0.001456 0.01023
GO:0072522 purine-containing compound biosynthetic process 2.17% (4/184) 3.03 0.001517 0.010517
GO:1902494 catalytic complex 3.8% (7/184) 2.06 0.001562 0.010691
GO:0031667 response to nutrient levels 1.09% (2/184) 4.95 0.001841 0.012291
GO:0009991 response to extracellular stimulus 1.09% (2/184) 4.95 0.001841 0.012291
GO:0019438 aromatic compound biosynthetic process 4.35% (8/184) 1.83 0.00204 0.013451
GO:0034654 nucleobase-containing compound biosynthetic process 3.8% (7/184) 1.98 0.002181 0.014205
GO:0055086 nucleobase-containing small molecule metabolic process 3.26% (6/184) 2.17 0.002302 0.01481
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.63% (3/184) 3.51 0.002367 0.015048
GO:1901293 nucleoside phosphate biosynthetic process 2.17% (4/184) 2.83 0.002472 0.015347
GO:0009165 nucleotide biosynthetic process 2.17% (4/184) 2.83 0.002472 0.015347
GO:0004089 carbonate dehydratase activity 1.09% (2/184) 4.63 0.002898 0.017791
GO:0005261 monoatomic cation channel activity 1.63% (3/184) 3.39 0.002963 0.017978
GO:0016829 lyase activity 3.26% (6/184) 2.08 0.003139 0.018833
GO:1901135 carbohydrate derivative metabolic process 3.26% (6/184) 2.06 0.003379 0.020051
GO:0006352 DNA-templated transcription initiation 1.63% (3/184) 3.31 0.003465 0.020331
GO:0005216 monoatomic ion channel activity 2.17% (4/184) 2.69 0.00355 0.020605
GO:0044281 small molecule metabolic process 5.98% (11/184) 1.37 0.0039 0.022155
GO:1901564 organonitrogen compound metabolic process 16.85% (31/184) 0.72 0.003867 0.022205
GO:0009765 photosynthesis, light harvesting 1.09% (2/184) 4.37 0.004179 0.023005
GO:0004659 prenyltransferase activity 1.09% (2/184) 4.37 0.004179 0.023005
GO:0016615 malate dehydrogenase activity 1.09% (2/184) 4.37 0.004179 0.023005
GO:0008150 biological_process 41.85% (77/184) 0.37 0.004335 0.02362
GO:1901137 carbohydrate derivative biosynthetic process 2.17% (4/184) 2.57 0.004774 0.025752
GO:0009767 photosynthetic electron transport chain 1.09% (2/184) 4.21 0.005153 0.027516
GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity 0.54% (1/184) 7.54 0.005391 0.028504
GO:0010035 response to inorganic substance 1.09% (2/184) 4.14 0.005675 0.029711
GO:0046148 pigment biosynthetic process 1.09% (2/184) 3.89 0.007994 0.041443
GO:0042372 phylloquinone biosynthetic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0042374 phylloquinone metabolic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0042373 vitamin K metabolic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0009704 de-etiolation 0.54% (1/184) 6.54 0.010754 0.042854
GO:0051592 response to calcium ion 0.54% (1/184) 6.54 0.010754 0.042854
GO:0071241 cellular response to inorganic substance 0.54% (1/184) 6.54 0.010754 0.042854
GO:0071248 cellular response to metal ion 0.54% (1/184) 6.54 0.010754 0.042854
GO:0071277 cellular response to calcium ion 0.54% (1/184) 6.54 0.010754 0.042854
GO:0090333 regulation of stomatal closure 0.54% (1/184) 6.54 0.010754 0.042854
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0042362 fat-soluble vitamin biosynthetic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0009902 chloroplast relocation 0.54% (1/184) 6.54 0.010754 0.042854
GO:0006775 fat-soluble vitamin metabolic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0019750 chloroplast localization 0.54% (1/184) 6.54 0.010754 0.042854
GO:0051644 plastid localization 0.54% (1/184) 6.54 0.010754 0.042854
GO:0046938 phytochelatin biosynthetic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0046937 phytochelatin metabolic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0051667 establishment of plastid localization 0.54% (1/184) 6.54 0.010754 0.042854
GO:0044550 secondary metabolite biosynthetic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:0004614 phosphoglucomutase activity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0042371 vitamin K biosynthetic process 0.54% (1/184) 6.54 0.010754 0.042854
GO:1901701 cellular response to oxygen-containing compound 0.54% (1/184) 6.54 0.010754 0.042854
GO:1902075 cellular response to salt 0.54% (1/184) 6.54 0.010754 0.042854
GO:0009644 response to high light intensity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0005960 glycine cleavage complex 0.54% (1/184) 6.54 0.010754 0.042854
GO:0019464 glycine decarboxylation via glycine cleavage system 0.54% (1/184) 6.54 0.010754 0.042854
GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0009642 response to light intensity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0008974 phosphoribulokinase activity 0.54% (1/184) 6.54 0.010754 0.042854
GO:0042440 pigment metabolic process 1.09% (2/184) 3.63 0.011388 0.045047
GO:0009628 response to abiotic stimulus 1.63% (3/184) 2.68 0.011733 0.046068
GO:0022803 passive transmembrane transporter activity 2.17% (4/184) 2.19 0.011934 0.046178
GO:0015267 channel activity 2.17% (4/184) 2.19 0.011934 0.046178
GO:0009110 vitamin biosynthetic process 1.09% (2/184) 3.58 0.012131 0.046604
GO:0022890 inorganic cation transmembrane transporter activity 2.72% (5/184) 1.98 0.009126 0.046861
GO:0015075 monoatomic ion transmembrane transporter activity 3.26% (6/184) 1.75 0.009506 0.048345
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (184) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms