Coexpression cluster: Cluster_173 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030554 adenyl nucleotide binding 22.1% (40/181) 1.53 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 21.55% (39/181) 1.57 0.0 0.0
GO:0097367 carbohydrate derivative binding 22.1% (40/181) 1.45 0.0 0.0
GO:0036094 small molecule binding 23.76% (43/181) 1.37 0.0 0.0
GO:1901265 nucleoside phosphate binding 23.2% (42/181) 1.4 0.0 0.0
GO:0000166 nucleotide binding 23.2% (42/181) 1.4 0.0 0.0
GO:0032555 purine ribonucleotide binding 21.55% (39/181) 1.45 0.0 0.0
GO:0017076 purine nucleotide binding 22.1% (40/181) 1.42 0.0 0.0
GO:0032553 ribonucleotide binding 21.55% (39/181) 1.43 0.0 0.0
GO:1901363 heterocyclic compound binding 23.2% (42/181) 1.35 0.0 1e-06
GO:0043168 anion binding 22.1% (40/181) 1.32 0.0 2e-06
GO:0006468 protein phosphorylation 13.26% (24/181) 1.84 0.0 3e-06
GO:0016310 phosphorylation 13.26% (24/181) 1.82 0.0 3e-06
GO:0004672 protein kinase activity 13.26% (24/181) 1.8 0.0 4e-06
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.26% (24/181) 1.67 1e-06 1.8e-05
GO:0036211 protein modification process 15.47% (28/181) 1.48 1e-06 2.4e-05
GO:0016301 kinase activity 13.26% (24/181) 1.61 1e-06 3e-05
GO:0016740 transferase activity 21.55% (39/181) 1.12 3e-06 6.1e-05
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.81% (25/181) 1.5 3e-06 6.2e-05
GO:0005524 ATP binding 16.02% (29/181) 1.34 4e-06 8.2e-05
GO:0043412 macromolecule modification 15.47% (28/181) 1.36 5e-06 9.3e-05
GO:0140096 catalytic activity, acting on a protein 16.57% (30/181) 1.29 5e-06 0.0001
GO:0043531 ADP binding 5.52% (10/181) 2.6 7e-06 0.000129
GO:0006796 phosphate-containing compound metabolic process 13.26% (24/181) 1.4 1.4e-05 0.000255
GO:0006793 phosphorus metabolic process 13.26% (24/181) 1.4 1.5e-05 0.000257
GO:0097159 organic cyclic compound binding 30.94% (56/181) 0.77 2.1e-05 0.000359
GO:0035639 purine ribonucleoside triphosphate binding 16.02% (29/181) 1.2 2.3e-05 0.000373
GO:0006950 response to stress 8.84% (16/181) 1.74 2.8e-05 0.000428
GO:0006952 defense response 6.08% (11/181) 2.17 3.8e-05 0.000573
GO:0043167 ion binding 25.41% (46/181) 0.8 8.7e-05 0.001258
GO:0004674 protein serine/threonine kinase activity 3.31% (6/181) 2.98 0.00012 0.001682
GO:1901564 organonitrogen compound metabolic process 19.34% (35/181) 0.92 0.00017 0.002316
GO:0008150 biological_process 45.3% (82/181) 0.48 0.000188 0.002475
GO:0003824 catalytic activity 36.46% (66/181) 0.58 0.000202 0.00258
GO:0050896 response to stimulus 8.84% (16/181) 1.44 0.000304 0.003772
GO:0019538 protein metabolic process 16.02% (29/181) 0.95 0.000485 0.005855
GO:0003674 molecular_function 61.33% (111/181) 0.32 0.000564 0.006628
GO:0005488 binding 43.09% (78/181) 0.46 0.000611 0.006993
GO:0043170 macromolecule metabolic process 19.89% (36/181) 0.77 0.000964 0.010748
GO:0006807 nitrogen compound metabolic process 21.55% (39/181) 0.71 0.001216 0.013228
GO:0061630 ubiquitin protein ligase activity 2.21% (4/181) 3.0 0.001609 0.017074
GO:0061659 ubiquitin-like protein ligase activity 2.21% (4/181) 2.99 0.001673 0.017329
GO:0043565 sequence-specific DNA binding 3.87% (7/181) 2.02 0.001825 0.018459
GO:0031982 vesicle 1.1% (2/181) 4.75 0.002441 0.021669
GO:0030136 clathrin-coated vesicle 1.1% (2/181) 4.75 0.002441 0.021669
GO:0030135 coated vesicle 1.1% (2/181) 4.75 0.002441 0.021669
GO:0005545 1-phosphatidylinositol binding 1.1% (2/181) 4.75 0.002441 0.021669
GO:0031410 cytoplasmic vesicle 1.1% (2/181) 4.75 0.002441 0.021669
GO:0097708 intracellular vesicle 1.1% (2/181) 4.75 0.002441 0.021669
GO:2000369 regulation of clathrin-dependent endocytosis 1.1% (2/181) 4.65 0.002807 0.023035
GO:0048268 clathrin coat assembly 1.1% (2/181) 4.65 0.002807 0.023035
GO:0048259 regulation of receptor-mediated endocytosis 1.1% (2/181) 4.65 0.002807 0.023035
GO:0030100 regulation of endocytosis 1.1% (2/181) 4.65 0.002807 0.023035
GO:0060627 regulation of vesicle-mediated transport 1.1% (2/181) 4.56 0.003196 0.025749
GO:0006032 chitin catabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:0006022 aminoglycan metabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:0006030 chitin metabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:0006026 aminoglycan catabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:0046348 amino sugar catabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:1901071 glucosamine-containing compound metabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:1901072 glucosamine-containing compound catabolic process 1.1% (2/181) 4.39 0.004047 0.028395
GO:0004568 chitinase activity 1.1% (2/181) 4.39 0.004047 0.028395
GO:0030276 clathrin binding 1.1% (2/181) 4.31 0.004508 0.031123
GO:0044238 primary metabolic process 23.76% (43/181) 0.56 0.004648 0.031593
GO:0006040 amino sugar metabolic process 1.1% (2/181) 4.17 0.005497 0.034161
GO:0045927 positive regulation of growth 1.1% (2/181) 4.17 0.005497 0.034161
GO:0071985 multivesicular body sorting pathway 1.1% (2/181) 4.17 0.005497 0.034161
GO:0006666 3-keto-sphinganine metabolic process 0.55% (1/181) 7.56 0.005303 0.034433
GO:0047560 3-dehydrosphinganine reductase activity 0.55% (1/181) 7.56 0.005303 0.034433
GO:0046519 sphingoid metabolic process 0.55% (1/181) 7.56 0.005303 0.034433
GO:0003700 DNA-binding transcription factor activity 6.08% (11/181) 1.26 0.006866 0.042064
GO:0071704 organic substance metabolic process 24.86% (45/181) 0.51 0.007033 0.042492
GO:0044237 cellular metabolic process 18.78% (34/181) 0.61 0.007488 0.044622
GO:0008194 UDP-glycosyltransferase activity 3.31% (6/181) 1.81 0.007643 0.044929
GO:0008037 cell recognition 1.66% (3/181) 2.86 0.008341 0.04774
GO:0048544 recognition of pollen 1.66% (3/181) 2.86 0.008341 0.04774
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (181) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms