Coexpression cluster: Cluster_219 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009664 plant-type cell wall organization 5.49% (5/91) 5.52 0.0 2.4e-05
GO:0071669 plant-type cell wall organization or biogenesis 5.49% (5/91) 5.32 0.0 2.4e-05
GO:0005576 extracellular region 7.69% (7/91) 3.89 1e-06 3.5e-05
GO:0055085 transmembrane transport 14.29% (13/91) 2.51 0.0 4.1e-05
GO:0071554 cell wall organization or biogenesis 6.59% (6/91) 4.01 2e-06 0.000121
GO:0071555 cell wall organization 5.49% (5/91) 4.52 3e-06 0.000132
GO:0051213 dioxygenase activity 4.4% (4/91) 5.09 6e-06 0.000152
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 4.4% (4/91) 5.09 6e-06 0.000152
GO:0005215 transporter activity 14.29% (13/91) 2.19 5e-06 0.000164
GO:0022857 transmembrane transporter activity 14.29% (13/91) 2.22 4e-06 0.000167
GO:0045229 external encapsulating structure organization 5.49% (5/91) 4.35 5e-06 0.000174
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 4.4% (4/91) 4.77 1.5e-05 0.000315
GO:0015318 inorganic molecular entity transmembrane transporter activity 7.69% (7/91) 3.17 1.4e-05 0.000322
GO:0009987 cellular process 38.46% (35/91) 0.99 1.9e-05 0.000383
GO:0015112 nitrate transmembrane transporter activity 2.2% (2/91) 7.23 7e-05 0.001315
GO:0051234 establishment of localization 14.29% (13/91) 1.77 0.000109 0.001543
GO:0009267 cellular response to starvation 2.2% (2/91) 6.97 0.000105 0.001555
GO:0016036 cellular response to phosphate starvation 2.2% (2/91) 6.97 0.000105 0.001555
GO:0042594 response to starvation 2.2% (2/91) 6.97 0.000105 0.001555
GO:0006810 transport 14.29% (13/91) 1.79 9.2e-05 0.001619
GO:0051179 localization 14.29% (13/91) 1.75 0.000122 0.001641
GO:0071496 cellular response to external stimulus 2.2% (2/91) 6.74 0.000146 0.00172
GO:0031669 cellular response to nutrient levels 2.2% (2/91) 6.74 0.000146 0.00172
GO:0031668 cellular response to extracellular stimulus 2.2% (2/91) 6.74 0.000146 0.00172
GO:0008150 biological_process 50.55% (46/91) 0.64 0.000244 0.002755
GO:0009991 response to extracellular stimulus 2.2% (2/91) 5.97 0.000456 0.004593
GO:0031667 response to nutrient levels 2.2% (2/91) 5.97 0.000456 0.004593
GO:0007154 cell communication 2.2% (2/91) 5.97 0.000456 0.004593
GO:0042744 hydrogen peroxide catabolic process 4.4% (4/91) 3.43 0.000535 0.005031
GO:0042743 hydrogen peroxide metabolic process 4.4% (4/91) 3.43 0.000535 0.005031
GO:0072593 reactive oxygen species metabolic process 4.4% (4/91) 3.31 0.00073 0.00664
GO:0016491 oxidoreductase activity 13.19% (12/91) 1.54 0.000856 0.007547
GO:0005315 inorganic phosphate transmembrane transporter activity 2.2% (2/91) 5.46 0.000932 0.007727
GO:0006817 phosphate ion transport 2.2% (2/91) 5.46 0.000932 0.007727
GO:0003824 catalytic activity 39.56% (36/91) 0.69 0.001006 0.008108
GO:0042578 phosphoric ester hydrolase activity 5.49% (5/91) 2.68 0.001148 0.008992
GO:0006979 response to oxidative stress 4.4% (4/91) 3.11 0.001235 0.009414
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 4.4% (4/91) 3.08 0.001343 0.00971
GO:0004601 peroxidase activity 4.4% (4/91) 3.08 0.001343 0.00971
GO:0016209 antioxidant activity 4.4% (4/91) 2.9 0.002093 0.014753
GO:0003993 acid phosphatase activity 2.2% (2/91) 4.46 0.003732 0.025667
GO:0019953 sexual reproduction 2.2% (2/91) 4.38 0.004176 0.027388
GO:0000003 reproduction 2.2% (2/91) 4.38 0.004176 0.027388
GO:0015103 inorganic anion transmembrane transporter activity 2.2% (2/91) 4.3 0.004644 0.029102
GO:0016791 phosphatase activity 4.4% (4/91) 2.59 0.004565 0.029256
GO:0009605 response to external stimulus 3.3% (3/91) 3.14 0.004923 0.030177
GO:0047918 GDP-mannose 3,5-epimerase activity 1.1% (1/91) 7.55 0.005326 0.031954
GO:0015698 inorganic anion transport 2.2% (2/91) 4.06 0.006461 0.03796
GO:0034755 iron ion transmembrane transport 1.1% (1/91) 6.97 0.007978 0.038132
GO:0033731 arogenate dehydrogenase [NAD(P)+] activity 1.1% (1/91) 6.97 0.007978 0.038132
GO:0033730 arogenate dehydrogenase (NADP+) activity 1.1% (1/91) 6.97 0.007978 0.038132
GO:0006571 tyrosine biosynthetic process 1.1% (1/91) 6.97 0.007978 0.038132
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.1% (1/91) 6.97 0.007978 0.038132
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.1% (1/91) 6.97 0.007978 0.038132
GO:0005381 iron ion transmembrane transporter activity 1.1% (1/91) 6.97 0.007978 0.038132
GO:0110165 cellular anatomical entity 15.38% (14/91) 1.03 0.008133 0.038226
GO:1901702 salt transmembrane transporter activity 3.3% (3/91) 2.98 0.006687 0.038483
GO:0030001 metal ion transport 3.3% (3/91) 2.91 0.007623 0.042151
GO:0046873 metal ion transmembrane transporter activity 3.3% (3/91) 2.89 0.007904 0.042864
GO:0040008 regulation of growth 2.2% (2/91) 3.94 0.007623 0.042991
GO:0071840 cellular component organization or biogenesis 6.59% (6/91) 1.72 0.009844 0.045508
GO:0006570 tyrosine metabolic process 1.1% (1/91) 6.55 0.010623 0.048319
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (91) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms