Coexpression cluster: Cluster_112 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009070 serine family amino acid biosynthetic process 3.53% (3/85) 5.65 2.9e-05 0.003128
GO:1901607 alpha-amino acid biosynthetic process 4.71% (4/85) 4.13 8.5e-05 0.00342
GO:0006520 amino acid metabolic process 7.06% (6/85) 3.16 6e-05 0.003883
GO:0009069 serine family amino acid metabolic process 3.53% (3/85) 5.15 8.4e-05 0.003893
GO:0000096 sulfur amino acid metabolic process 3.53% (3/85) 5.15 8.4e-05 0.003893
GO:0006563 L-serine metabolic process 3.53% (3/85) 5.71 2.5e-05 0.004113
GO:0000097 sulfur amino acid biosynthetic process 3.53% (3/85) 5.33 5.8e-05 0.004656
GO:0046394 carboxylic acid biosynthetic process 5.88% (5/85) 3.27 0.000177 0.005196
GO:0016053 organic acid biosynthetic process 5.88% (5/85) 3.27 0.000177 0.005196
GO:0008652 amino acid biosynthetic process 4.71% (4/85) 3.92 0.000147 0.005264
GO:0004124 cysteine synthase activity 2.35% (2/85) 6.48 0.000218 0.005873
GO:1901605 alpha-amino acid metabolic process 5.88% (5/85) 3.93 2.1e-05 0.006631
GO:0043167 ion binding 29.41% (25/85) 1.01 0.000333 0.008268
GO:0044283 small molecule biosynthetic process 5.88% (5/85) 2.98 0.000443 0.009547
GO:0044272 sulfur compound biosynthetic process 3.53% (3/85) 4.38 0.000417 0.009614
GO:0003824 catalytic activity 41.18% (35/85) 0.75 0.000496 0.010008
GO:0006535 cysteine biosynthetic process from serine 2.35% (2/85) 5.84 0.000547 0.010395
GO:0019344 cysteine biosynthetic process 2.35% (2/85) 5.74 0.00063 0.011309
GO:1901564 organonitrogen compound metabolic process 22.35% (19/85) 1.13 0.000831 0.014121
GO:0043168 anion binding 20.0% (17/85) 1.18 0.00111 0.017926
GO:1901363 heterocyclic compound binding 20.0% (17/85) 1.14 0.00153 0.018303
GO:0016740 transferase activity 21.18% (18/85) 1.1 0.001474 0.018307
GO:0044238 primary metabolic process 29.41% (25/85) 0.87 0.00145 0.018729
GO:0006534 cysteine metabolic process 2.35% (2/85) 5.26 0.001248 0.0192
GO:0006082 organic acid metabolic process 7.06% (6/85) 2.3 0.001427 0.019209
GO:0036094 small molecule binding 20.0% (17/85) 1.12 0.001674 0.019311
GO:0043436 oxoacid metabolic process 7.06% (6/85) 2.3 0.001413 0.019838
GO:0019752 carboxylic acid metabolic process 7.06% (6/85) 2.31 0.001369 0.020102
GO:0006790 sulfur compound metabolic process 3.53% (3/85) 3.62 0.001912 0.021296
GO:0018142 protein-DNA covalent cross-linking 1.18% (1/85) 8.65 0.002491 0.02366
GO:0018143 nucleic acid-protein covalent cross-linking 1.18% (1/85) 8.65 0.002491 0.02366
GO:0050017 L-3-cyanoalanine synthase activity 1.18% (1/85) 8.65 0.002491 0.02366
GO:0019499 cyanide metabolic process 1.18% (1/85) 8.65 0.002491 0.02366
GO:0004411 homogentisate 1,2-dioxygenase activity 1.18% (1/85) 8.65 0.002491 0.02366
GO:0006807 nitrogen compound metabolic process 24.71% (21/85) 0.91 0.002885 0.023893
GO:0016772 transferase activity, transferring phosphorus-containing groups 12.94% (11/85) 1.41 0.002773 0.024211
GO:0000166 nucleotide binding 18.82% (16/85) 1.1 0.002705 0.024269
GO:1901265 nucleoside phosphate binding 18.82% (16/85) 1.1 0.002705 0.024269
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.76% (10/85) 1.49 0.002872 0.024415
GO:0004497 monooxygenase activity 5.88% (5/85) 2.31 0.003464 0.027288
GO:0010181 FMN binding 2.35% (2/85) 4.52 0.003458 0.027921
GO:0097159 organic cyclic compound binding 30.59% (26/85) 0.75 0.003761 0.028254
GO:0016301 kinase activity 11.76% (10/85) 1.44 0.003739 0.028758
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 5.88% (5/85) 2.25 0.004163 0.030558
GO:0071704 organic substance metabolic process 29.41% (25/85) 0.76 0.004395 0.031544
GO:0004672 protein kinase activity 10.59% (9/85) 1.48 0.005028 0.033832
GO:1990610 acetolactate synthase regulator activity 1.18% (1/85) 7.65 0.004975 0.03419
GO:0046522 S-methyl-5-thioribose kinase activity 1.18% (1/85) 7.65 0.004975 0.03419
GO:0009584 detection of visible light 1.18% (1/85) 7.06 0.007453 0.040123
GO:0009581 detection of external stimulus 1.18% (1/85) 7.06 0.007453 0.040123
GO:0007602 phototransduction 1.18% (1/85) 7.06 0.007453 0.040123
GO:0009585 red, far-red light phototransduction 1.18% (1/85) 7.06 0.007453 0.040123
GO:0051606 detection of stimulus 1.18% (1/85) 7.06 0.007453 0.040123
GO:0000234 phosphoethanolamine N-methyltransferase activity 1.18% (1/85) 7.06 0.007453 0.040123
GO:0009582 detection of abiotic stimulus 1.18% (1/85) 7.06 0.007453 0.040123
GO:0009583 detection of light stimulus 1.18% (1/85) 7.06 0.007453 0.040123
GO:0018298 obsolete protein-chromophore linkage 1.18% (1/85) 7.06 0.007453 0.040123
GO:0097367 carbohydrate derivative binding 16.47% (14/85) 1.03 0.007958 0.04214
GO:0032553 ribonucleotide binding 16.47% (14/85) 1.04 0.007321 0.046364
GO:1901566 organonitrogen compound biosynthetic process 7.06% (6/85) 1.82 0.007134 0.047023
GO:0036211 protein modification process 12.94% (11/85) 1.22 0.007301 0.047162
GO:0019264 glycine biosynthetic process from serine 1.18% (1/85) 6.65 0.009925 0.048575
GO:0006545 glycine biosynthetic process 1.18% (1/85) 6.65 0.009925 0.048575
GO:0004372 glycine hydroxymethyltransferase activity 1.18% (1/85) 6.65 0.009925 0.048575
GO:0035999 tetrahydrofolate interconversion 1.18% (1/85) 6.65 0.009925 0.048575
GO:0006570 tyrosine metabolic process 1.18% (1/85) 6.65 0.009925 0.048575
GO:0008152 metabolic process 29.41% (25/85) 0.66 0.010187 0.04911
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (85) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms