Coexpression cluster: Cluster_193 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009657 plastid organization 2.67% (2/75) 5.92 0.000491 0.018063
GO:0009658 chloroplast organization 2.67% (2/75) 5.92 0.000491 0.018063
GO:0000373 Group II intron splicing 2.67% (2/75) 6.66 0.00017 0.018738
GO:0046483 heterocycle metabolic process 14.67% (11/75) 1.83 0.00024 0.01983
GO:1901360 organic cyclic compound metabolic process 14.67% (11/75) 1.76 0.000375 0.020709
GO:0006396 RNA processing 8.0% (6/75) 2.96 0.000126 0.020799
GO:0090304 nucleic acid metabolic process 13.33% (10/75) 2.18 6.9e-05 0.022738
GO:0006139 nucleobase-containing compound metabolic process 13.33% (10/75) 1.83 0.000481 0.022753
GO:0034641 cellular nitrogen compound metabolic process 16.0% (12/75) 1.66 0.000366 0.024246
GO:0010239 chloroplast mRNA processing 1.33% (1/75) 8.83 0.002198 0.029095
GO:0031425 chloroplast RNA processing 1.33% (1/75) 8.83 0.002198 0.029095
GO:0048366 leaf development 1.33% (1/75) 8.83 0.002198 0.029095
GO:0005983 starch catabolic process 1.33% (1/75) 8.83 0.002198 0.029095
GO:0004141 dethiobiotin synthase activity 1.33% (1/75) 8.83 0.002198 0.029095
GO:0042646 plastid nucleoid 1.33% (1/75) 8.83 0.002198 0.029095
GO:0042644 chloroplast nucleoid 1.33% (1/75) 8.83 0.002198 0.029095
GO:0009295 nucleoid 1.33% (1/75) 8.83 0.002198 0.029095
GO:0048827 phyllome development 1.33% (1/75) 8.83 0.002198 0.029095
GO:0090228 positive regulation of red or far-red light signaling pathway 1.33% (1/75) 8.83 0.002198 0.029095
GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity 1.33% (1/75) 8.83 0.002198 0.029095
GO:0090227 regulation of red or far-red light signaling pathway 1.33% (1/75) 8.83 0.002198 0.029095
GO:0009536 plastid 2.67% (2/75) 5.44 0.000974 0.032236
GO:0009416 response to light stimulus 2.67% (2/75) 4.74 0.002554 0.032516
GO:0009314 response to radiation 2.67% (2/75) 4.7 0.002705 0.033162
GO:0016070 RNA metabolic process 9.33% (7/75) 2.11 0.001203 0.03319
GO:0009987 cellular process 34.67% (26/75) 0.84 0.001352 0.034431
GO:0006725 cellular aromatic compound metabolic process 13.33% (10/75) 1.66 0.001179 0.035468
GO:0009251 glucan catabolic process 1.33% (1/75) 7.83 0.00439 0.046877
GO:0017038 protein import 1.33% (1/75) 7.83 0.00439 0.046877
GO:0006768 biotin metabolic process 1.33% (1/75) 7.83 0.00439 0.046877
GO:0009102 biotin biosynthetic process 1.33% (1/75) 7.83 0.00439 0.046877
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms