Coexpression cluster: Cluster_142 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051649 establishment of localization in cell 8.62% (5/58) 3.59 6.1e-05 0.003665
GO:0032784 regulation of DNA-templated transcription elongation 3.45% (2/58) 7.39 5.9e-05 0.004416
GO:0046907 intracellular transport 8.62% (5/58) 3.6 5.9e-05 0.005876
GO:0051641 cellular localization 10.34% (6/58) 3.38 2.4e-05 0.007057
GO:0005488 binding 56.9% (33/58) 0.86 5.3e-05 0.007829
GO:0016197 endosomal transport 3.45% (2/58) 5.62 0.000765 0.028488
GO:0016192 vesicle-mediated transport 6.9% (4/58) 3.37 0.00061 0.03031
GO:0005515 protein binding 27.59% (16/58) 1.24 0.000733 0.031214
GO:0000993 RNA polymerase II complex binding 1.72% (1/58) 8.2 0.003396 0.036144
GO:0006369 termination of RNA polymerase II transcription 1.72% (1/58) 8.2 0.003396 0.036144
GO:0001098 basal transcription machinery binding 1.72% (1/58) 8.2 0.003396 0.036144
GO:0098876 vesicle-mediated transport to the plasma membrane 1.72% (1/58) 8.2 0.003396 0.036144
GO:0010390 histone monoubiquitination 1.72% (1/58) 8.2 0.003396 0.036144
GO:0001099 basal RNA polymerase II transcription machinery binding 1.72% (1/58) 8.2 0.003396 0.036144
GO:0016574 histone ubiquitination 1.72% (1/58) 8.2 0.003396 0.036144
GO:0006997 nucleus organization 1.72% (1/58) 8.2 0.003396 0.036144
GO:0006513 protein monoubiquitination 1.72% (1/58) 8.2 0.003396 0.036144
GO:0034243 regulation of transcription elongation by RNA polymerase II 1.72% (1/58) 8.2 0.003396 0.036144
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 1.72% (1/58) 8.2 0.003396 0.036144
GO:0000347 THO complex 1.72% (1/58) 7.62 0.00509 0.037919
GO:0019902 phosphatase binding 1.72% (1/58) 7.62 0.00509 0.037919
GO:0019903 protein phosphatase binding 1.72% (1/58) 7.62 0.00509 0.037919
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.72% (1/58) 7.62 0.00509 0.037919
GO:0031929 TOR signaling 1.72% (1/58) 7.62 0.00509 0.037919
GO:0031213 RSF complex 1.72% (1/58) 7.62 0.00509 0.037919
GO:0031010 ISWI-type complex 1.72% (1/58) 7.62 0.00509 0.037919
GO:0031931 TORC1 complex 1.72% (1/58) 7.62 0.00509 0.037919
GO:0038201 TOR complex 1.72% (1/58) 7.62 0.00509 0.037919
GO:0019787 ubiquitin-like protein transferase activity 5.17% (3/58) 3.09 0.005381 0.038181
GO:0050794 regulation of cellular process 15.52% (9/58) 1.44 0.005299 0.038512
GO:0016755 aminoacyltransferase activity 5.17% (3/58) 3.04 0.005896 0.039934
GO:0015031 protein transport 5.17% (3/58) 3.04 0.005821 0.040341
GO:0071702 organic substance transport 6.9% (4/58) 2.45 0.006169 0.040853
GO:0008150 biological_process 50.0% (29/58) 0.63 0.003976 0.040859
GO:0065007 biological regulation 15.52% (9/58) 1.32 0.00912 0.041176
GO:0009889 regulation of biosynthetic process 12.07% (7/58) 1.57 0.009061 0.041543
GO:0031326 regulation of cellular biosynthetic process 12.07% (7/58) 1.57 0.009061 0.041543
GO:0003958 NADPH-hemoprotein reductase activity 1.72% (1/58) 7.2 0.006781 0.042097
GO:0043175 RNA polymerase core enzyme binding 1.72% (1/58) 7.2 0.006781 0.042097
GO:0000775 chromosome, centromeric region 1.72% (1/58) 7.2 0.006781 0.042097
GO:0080090 regulation of primary metabolic process 12.07% (7/58) 1.58 0.008695 0.042478
GO:0051171 regulation of nitrogen compound metabolic process 12.07% (7/58) 1.58 0.008565 0.042538
GO:0010556 regulation of macromolecule biosynthetic process 12.07% (7/58) 1.57 0.008994 0.042543
GO:0070063 RNA polymerase binding 1.72% (1/58) 6.88 0.008469 0.042775
GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor 1.72% (1/58) 6.88 0.008469 0.042775
GO:0006378 mRNA polyadenylation 1.72% (1/58) 6.88 0.008469 0.042775
GO:0006353 DNA-templated transcription termination 1.72% (1/58) 6.88 0.008469 0.042775
GO:0000278 mitotic cell cycle 1.72% (1/58) 6.88 0.008469 0.042775
GO:0010468 regulation of gene expression 12.07% (7/58) 1.57 0.008927 0.042907
GO:0006810 transport 12.07% (7/58) 1.55 0.00965 0.04292
GO:0007031 peroxisome organization 1.72% (1/58) 6.62 0.010154 0.044499
GO:0045184 establishment of protein localization 5.17% (3/58) 2.89 0.007792 0.045532
GO:0051234 establishment of localization 12.07% (7/58) 1.52 0.010566 0.04563
GO:1990745 EARP complex 1.72% (1/58) 9.2 0.001699 0.046039
GO:0032456 endocytic recycling 1.72% (1/58) 9.2 0.001699 0.046039
GO:0003723 RNA binding 8.62% (5/58) 2.02 0.007736 0.046106
GO:0070727 cellular macromolecule localization 5.17% (3/58) 2.85 0.008433 0.046536
GO:0033036 macromolecule localization 5.17% (3/58) 2.85 0.008433 0.046536
GO:0008104 protein localization 5.17% (3/58) 2.85 0.008433 0.046536
GO:0019899 enzyme binding 3.45% (2/58) 4.29 0.004716 0.046844
GO:0050789 regulation of biological process 15.52% (9/58) 1.36 0.007713 0.046905
GO:0051179 localization 12.07% (7/58) 1.51 0.011184 0.047612
GO:0004842 ubiquitin-protein transferase activity 5.17% (3/58) 3.13 0.004962 0.0477
GO:0043227 membrane-bounded organelle 6.9% (4/58) 2.16 0.012208 0.047869
GO:0043231 intracellular membrane-bounded organelle 6.9% (4/58) 2.16 0.012208 0.047869
GO:0098687 chromosomal region 1.72% (1/58) 6.39 0.011837 0.048319
GO:0035304 regulation of protein dephosphorylation 1.72% (1/58) 6.39 0.011837 0.048319
GO:0043666 regulation of phosphoprotein phosphatase activity 1.72% (1/58) 6.39 0.011837 0.048319
GO:0005575 cellular_component 20.69% (12/58) 1.03 0.012095 0.048708
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (58) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms