Coexpression cluster: Cluster_2802 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1902025 nitrate import 11.11% (1/9) 10.74 0.000584 0.022336
GO:0015706 nitrate transmembrane transport 11.11% (1/9) 10.74 0.000584 0.022336
GO:0009987 cellular process 66.67% (6/9) 1.86 0.001965 0.030068
GO:0071249 cellular response to nitrate 11.11% (1/9) 11.27 0.000404 0.030929
GO:1902170 cellular response to reactive nitrogen species 11.11% (1/9) 11.27 0.000404 0.030929
GO:1901699 cellular response to nitrogen compound 11.11% (1/9) 9.03 0.001915 0.032562
GO:0010167 response to nitrate 11.11% (1/9) 9.3 0.001586 0.034675
GO:0061608 nuclear import signal receptor activity 11.11% (1/9) 8.64 0.002498 0.03475
GO:0006346 DNA methylation-dependent heterochromatin formation 11.11% (1/9) 7.8 0.004484 0.036109
GO:0140718 facultative heterochromatin formation 11.11% (1/9) 7.8 0.004484 0.036109
GO:0080188 gene silencing by RNA-directed DNA methylation 11.11% (1/9) 7.8 0.004484 0.036109
GO:0015112 nitrate transmembrane transporter activity 11.11% (1/9) 9.04 0.0019 0.036346
GO:0098661 inorganic anion transmembrane transport 11.11% (1/9) 8.45 0.002857 0.036426
GO:1901701 cellular response to oxygen-containing compound 11.11% (1/9) 8.33 0.003096 0.036437
GO:0140142 nucleocytoplasmic carrier activity 11.11% (1/9) 7.6 0.00514 0.03745
GO:0031048 regulatory ncRNA-mediated heterochromatin formation 11.11% (1/9) 7.62 0.005066 0.038753
GO:1902075 cellular response to salt 11.11% (1/9) 9.31 0.001571 0.040072
GO:0071241 cellular response to inorganic substance 11.11% (1/9) 9.31 0.001571 0.040072
GO:0071705 nitrogen compound transport 22.22% (2/9) 4.3 0.004321 0.041316
GO:1902074 response to salt 11.11% (1/9) 7.92 0.004111 0.041933
GO:0008139 nuclear localization sequence binding 11.11% (1/9) 7.99 0.003932 0.042971
GO:0005048 signal sequence binding 11.11% (1/9) 6.99 0.007865 0.042978
GO:0015103 inorganic anion transmembrane transporter activity 11.11% (1/9) 7.01 0.007746 0.043895
GO:0042277 peptide binding 11.11% (1/9) 6.87 0.008504 0.044868
GO:0070887 cellular response to chemical stimulus 11.11% (1/9) 7.03 0.007642 0.044971
GO:0070828 heterochromatin organization 11.11% (1/9) 7.08 0.007389 0.045222
GO:0045814 negative regulation of gene expression, epigenetic 11.11% (1/9) 7.08 0.007389 0.045222
GO:0031507 heterochromatin formation 11.11% (1/9) 7.08 0.007389 0.045222
GO:0051170 import into nucleus 11.11% (1/9) 6.63 0.010064 0.045288
GO:0006606 protein import into nucleus 11.11% (1/9) 6.64 0.00996 0.046179
GO:0034504 protein localization to nucleus 11.11% (1/9) 6.64 0.00996 0.046179
GO:0140104 molecular carrier activity 11.11% (1/9) 6.73 0.009381 0.0463
GO:0010035 response to inorganic substance 11.11% (1/9) 6.73 0.009381 0.0463
GO:0033218 amide binding 11.11% (1/9) 6.51 0.01091 0.046367
GO:0040029 epigenetic regulation of gene expression 11.11% (1/9) 6.53 0.010791 0.047173
GO:0015698 inorganic anion transport 11.11% (1/9) 7.19 0.006809 0.047352
GO:0005886 plasma membrane 22.22% (2/9) 3.5 0.012712 0.047437
GO:0070279 vitamin B6 binding 11.11% (1/9) 6.31 0.012496 0.047796
GO:0030170 pyridoxal phosphate binding 11.11% (1/9) 6.31 0.012496 0.047796
GO:0016831 carboxy-lyase activity 11.11% (1/9) 6.42 0.011592 0.047934
GO:0031047 regulatory ncRNA-mediated gene silencing 11.11% (1/9) 6.22 0.013295 0.048432
GO:1901698 response to nitrogen compound 11.11% (1/9) 6.34 0.012288 0.049476
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (9) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms