Coexpression cluster: Cluster_248 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005575 cellular_component 24.1% (47/195) 1.25 0.0 7e-06
GO:0032991 protein-containing complex 11.79% (23/195) 1.87 0.0 2.5e-05
GO:0016192 vesicle-mediated transport 4.62% (9/195) 2.79 7e-06 0.001229
GO:0005838 proteasome regulatory particle 1.03% (2/195) 7.45 3.2e-05 0.004312
GO:0009987 cellular process 31.28% (61/195) 0.69 5e-05 0.005344
GO:0030131 clathrin adaptor complex 1.54% (3/195) 5.23 6.4e-05 0.005648
GO:0003924 GTPase activity 3.59% (7/195) 2.74 9.3e-05 0.007048
GO:0019001 guanyl nucleotide binding 3.59% (7/195) 2.44 0.00033 0.010953
GO:0035615 clathrin adaptor activity 1.03% (2/195) 6.13 0.000321 0.011368
GO:0140312 cargo adaptor activity 1.03% (2/195) 6.13 0.000321 0.011368
GO:0003674 molecular_function 61.03% (119/195) 0.32 0.000481 0.011604
GO:0044238 primary metabolic process 25.64% (50/195) 0.67 0.000405 0.011946
GO:0032561 guanyl ribonucleotide binding 3.59% (7/195) 2.47 0.000296 0.012098
GO:0005525 GTP binding 3.59% (7/195) 2.47 0.000296 0.012098
GO:0006897 endocytosis 1.03% (2/195) 5.87 0.00048 0.012134
GO:0098657 import into cell 1.03% (2/195) 5.87 0.00048 0.012134
GO:0048193 Golgi vesicle transport 2.05% (4/195) 3.54 0.000392 0.012257
GO:0008150 biological_process 44.62% (87/195) 0.46 0.000232 0.012313
GO:1901576 organic substance biosynthetic process 9.74% (19/195) 1.31 0.000257 0.012414
GO:1902494 catalytic complex 4.1% (8/195) 2.17 0.000448 0.012511
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 1.54% (3/195) 4.71 0.000195 0.012937
GO:0030119 AP-type membrane coat adaptor complex 1.54% (3/195) 4.64 0.000226 0.013359
GO:0019843 rRNA binding 1.54% (3/195) 4.18 0.000602 0.013887
GO:0051641 cellular localization 4.1% (8/195) 2.05 0.000771 0.014617
GO:0006099 tricarboxylic acid cycle 1.54% (3/195) 4.13 0.000666 0.014725
GO:0110165 cellular anatomical entity 14.36% (28/195) 0.93 0.000768 0.015107
GO:0098796 membrane protein complex 3.59% (7/195) 2.25 0.000744 0.015196
GO:0009058 biosynthetic process 9.74% (19/195) 1.19 0.000732 0.015551
GO:0016272 prefoldin complex 1.03% (2/195) 5.45 0.000889 0.016279
GO:0008135 translation factor activity, RNA binding 2.05% (4/195) 3.2 0.000962 0.016472
GO:0090079 translation regulator activity, nucleic acid binding 2.05% (4/195) 3.2 0.000962 0.016472
GO:0016125 sterol metabolic process 1.03% (2/195) 5.28 0.001139 0.018897
GO:0045182 translation regulator activity 2.05% (4/195) 3.09 0.001277 0.020541
GO:0070122 obsolete isopeptidase activity 1.03% (2/195) 4.99 0.001727 0.025469
GO:0140492 metal-dependent deubiquitinase activity 1.03% (2/195) 4.99 0.001727 0.025469
GO:0030163 protein catabolic process 1.54% (3/195) 3.64 0.00179 0.025682
GO:0044271 cellular nitrogen compound biosynthetic process 6.15% (12/195) 1.43 0.00187 0.026127
GO:0017111 ribonucleoside triphosphate phosphatase activity 4.62% (9/195) 1.73 0.001715 0.026778
GO:0008152 metabolic process 27.18% (53/195) 0.55 0.002 0.027225
GO:0003743 translation initiation factor activity 1.54% (3/195) 3.54 0.002184 0.028998
GO:0071704 organic substance metabolic process 25.64% (50/195) 0.56 0.002424 0.031395
GO:0016462 pyrophosphatase activity 4.62% (9/195) 1.64 0.002588 0.032724
GO:0006807 nitrogen compound metabolic process 20.51% (40/195) 0.64 0.002756 0.034035
GO:0051649 establishment of localization in cell 3.08% (6/195) 2.1 0.002949 0.034043
GO:0016817 hydrolase activity, acting on acid anhydrides 4.62% (9/195) 1.61 0.003024 0.034162
GO:0046907 intracellular transport 3.08% (6/195) 2.11 0.002832 0.034182
GO:0006810 transport 8.72% (17/195) 1.08 0.003118 0.034496
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.62% (9/195) 1.62 0.002947 0.034779
GO:0051234 establishment of localization 8.72% (17/195) 1.05 0.00372 0.038735
GO:0043170 macromolecule metabolic process 18.46% (36/195) 0.66 0.003651 0.038774
GO:0009059 macromolecule biosynthetic process 5.13% (10/195) 1.47 0.003579 0.038785
GO:0051179 localization 8.72% (17/195) 1.04 0.004154 0.042418
GO:0009617 response to bacterium 1.03% (2/195) 4.13 0.005767 0.042531
GO:0005739 mitochondrion 1.03% (2/195) 4.13 0.005767 0.042531
GO:0006913 nucleocytoplasmic transport 1.54% (3/195) 3.2 0.004284 0.042922
GO:0045252 oxoglutarate dehydrogenase complex 0.51% (1/195) 7.45 0.005714 0.043342
GO:0045240 dihydrolipoyl dehydrogenase complex 0.51% (1/195) 7.45 0.005714 0.043342
GO:0004048 anthranilate phosphoribosyltransferase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0006446 regulation of translational initiation 0.51% (1/195) 7.45 0.005714 0.043342
GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0004152 dihydroorotate dehydrogenase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0009349 riboflavin synthase complex 0.51% (1/195) 7.45 0.005714 0.043342
GO:0016751 S-succinyltransferase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0016748 succinyltransferase activity 0.51% (1/195) 7.45 0.005714 0.043342
GO:0005515 protein binding 17.95% (35/195) 0.62 0.006208 0.043374
GO:1901566 organonitrogen compound biosynthetic process 5.13% (10/195) 1.36 0.006051 0.043423
GO:0044249 cellular biosynthetic process 7.69% (15/195) 1.1 0.00476 0.043581
GO:0019538 protein metabolic process 13.85% (27/195) 0.74 0.006175 0.043718
GO:0006457 protein folding 2.05% (4/195) 2.47 0.006017 0.043766
GO:0051169 nuclear transport 1.54% (3/195) 3.15 0.00472 0.043974
GO:0034641 cellular nitrogen compound metabolic process 9.74% (19/195) 0.95 0.004917 0.044257
GO:0006289 nucleotide-excision repair 1.03% (2/195) 4.28 0.004679 0.044365
GO:0005852 eukaryotic translation initiation factor 3 complex 1.03% (2/195) 4.28 0.004679 0.044365
GO:0006518 peptide metabolic process 3.59% (7/195) 1.78 0.004555 0.044792
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (195) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms