Coexpression cluster: Cluster_335 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006900 vesicle budding from membrane 3.51% (2/57) 8.23 1.6e-05 0.002158
GO:0090114 COPII-coated vesicle budding 3.51% (2/57) 8.23 1.6e-05 0.002158
GO:0016050 vesicle organization 3.51% (2/57) 6.77 0.000149 0.009815
GO:0030127 COPII vesicle coat 3.51% (2/57) 6.9 0.000122 0.010719
GO:0140096 catalytic activity, acting on a protein 21.05% (12/57) 1.63 0.000376 0.010981
GO:0036094 small molecule binding 24.56% (14/57) 1.42 0.000509 0.012174
GO:0003674 molecular_function 71.93% (41/57) 0.55 0.000371 0.012187
GO:1901363 heterocyclic compound binding 24.56% (14/57) 1.43 0.000468 0.012309
GO:0043168 anion binding 24.56% (14/57) 1.47 0.000347 0.013036
GO:0061024 membrane organization 3.51% (2/57) 5.7 0.000678 0.013714
GO:0017076 purine nucleotide binding 22.81% (13/57) 1.46 0.000644 0.01412
GO:0016740 transferase activity 26.32% (15/57) 1.41 0.000327 0.014349
GO:1901265 nucleoside phosphate binding 22.81% (13/57) 1.38 0.001094 0.014386
GO:0000166 nucleotide binding 22.81% (13/57) 1.38 0.001094 0.014386
GO:0030120 vesicle coat 3.51% (2/57) 5.53 0.000868 0.015219
GO:0008150 biological_process 52.63% (30/57) 0.7 0.001222 0.015299
GO:0016791 phosphatase activity 7.02% (4/57) 3.26 0.000819 0.01538
GO:0043167 ion binding 33.33% (19/57) 1.19 0.000294 0.015469
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 3.51% (2/57) 5.37 0.001081 0.015793
GO:0097367 carbohydrate derivative binding 21.05% (12/57) 1.38 0.001729 0.01624
GO:0005655 nucleolar ribonuclease P complex 1.75% (1/57) 9.23 0.00167 0.016268
GO:0043874 acireductone synthase activity 1.75% (1/57) 9.23 0.00167 0.016268
GO:0030681 multimeric ribonuclease P complex 1.75% (1/57) 9.23 0.00167 0.016268
GO:0043531 ADP binding 7.02% (4/57) 2.95 0.001806 0.016379
GO:0030554 adenyl nucleotide binding 21.05% (12/57) 1.46 0.001065 0.016478
GO:0016409 palmitoyltransferase activity 3.51% (2/57) 5.42 0.001007 0.016559
GO:0042578 phosphoric ester hydrolase activity 7.02% (4/57) 3.03 0.00147 0.01681
GO:0032555 purine ribonucleotide binding 21.05% (12/57) 1.41 0.001424 0.01702
GO:0032553 ribonucleotide binding 21.05% (12/57) 1.4 0.00159 0.017423
GO:0019538 protein metabolic process 21.05% (12/57) 1.34 0.002214 0.019413
GO:0030117 membrane coat 3.51% (2/57) 4.8 0.002368 0.019464
GO:0032559 adenyl ribonucleotide binding 19.3% (11/57) 1.41 0.002365 0.020062
GO:0003824 catalytic activity 42.11% (24/57) 0.78 0.002525 0.020122
GO:0000172 ribonuclease MRP complex 1.75% (1/57) 8.23 0.003338 0.024383
GO:0004779 sulfate adenylyltransferase activity 1.75% (1/57) 8.23 0.003338 0.024383
GO:0004781 sulfate adenylyltransferase (ATP) activity 1.75% (1/57) 8.23 0.003338 0.024383
GO:0006468 protein phosphorylation 12.28% (7/57) 1.73 0.005007 0.025819
GO:0015154 disaccharide transmembrane transporter activity 1.75% (1/57) 7.64 0.005002 0.026312
GO:0015766 disaccharide transport 1.75% (1/57) 7.64 0.005002 0.026312
GO:0008515 sucrose transmembrane transporter activity 1.75% (1/57) 7.64 0.005002 0.026312
GO:0015157 oligosaccharide transmembrane transporter activity 1.75% (1/57) 7.64 0.005002 0.026312
GO:0015770 sucrose transport 1.75% (1/57) 7.64 0.005002 0.026312
GO:0001682 tRNA 5'-leader removal 1.75% (1/57) 7.64 0.005002 0.026312
GO:0000966 RNA 5'-end processing 1.75% (1/57) 7.64 0.005002 0.026312
GO:0034471 ncRNA 5'-end processing 1.75% (1/57) 7.64 0.005002 0.026312
GO:0099116 tRNA 5'-end processing 1.75% (1/57) 7.64 0.005002 0.026312
GO:0030677 ribonuclease P complex 1.75% (1/57) 7.64 0.005002 0.026312
GO:0015772 oligosaccharide transport 1.75% (1/57) 7.64 0.005002 0.026312
GO:0016310 phosphorylation 12.28% (7/57) 1.71 0.005379 0.027204
GO:0036211 protein modification process 15.79% (9/57) 1.51 0.003959 0.028141
GO:0004672 protein kinase activity 12.28% (7/57) 1.69 0.005724 0.028405
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.04% (8/57) 1.53 0.006179 0.030096
GO:1901564 organonitrogen compound metabolic process 22.81% (13/57) 1.15 0.004358 0.03016
GO:0048193 Golgi vesicle transport 3.51% (2/57) 4.32 0.004558 0.03074
GO:1902555 endoribonuclease complex 1.75% (1/57) 7.23 0.006664 0.031867
GO:0043412 macromolecule modification 15.79% (9/57) 1.39 0.006855 0.032194
GO:0043102 amino acid salvage 1.75% (1/57) 6.9 0.008323 0.032672
GO:1905348 endonuclease complex 1.75% (1/57) 6.9 0.008323 0.032672
GO:0071267 L-methionine salvage 1.75% (1/57) 6.9 0.008323 0.032672
GO:0019509 L-methionine salvage from methylthioadenosine 1.75% (1/57) 6.9 0.008323 0.032672
GO:0000103 sulfate assimilation 1.75% (1/57) 6.9 0.008323 0.032672
GO:0006793 phosphorus metabolic process 14.04% (8/57) 1.48 0.00747 0.0333
GO:0006796 phosphate-containing compound metabolic process 14.04% (8/57) 1.48 0.007345 0.033306
GO:0006952 defense response 7.02% (4/57) 2.38 0.007329 0.033815
GO:0070727 cellular macromolecule localization 5.26% (3/57) 2.87 0.008039 0.034099
GO:0008104 protein localization 5.26% (3/57) 2.87 0.008039 0.034099
GO:0033036 macromolecule localization 5.26% (3/57) 2.87 0.008039 0.034099
GO:0009987 cellular process 33.33% (19/57) 0.78 0.009101 0.0352
GO:0016773 phosphotransferase activity, alcohol group as acceptor 12.28% (7/57) 1.55 0.00939 0.03579
GO:0016560 protein import into peroxisome matrix, docking 1.75% (1/57) 6.64 0.00998 0.036967
GO:0071265 L-methionine biosynthetic process 1.75% (1/57) 6.64 0.00998 0.036967
GO:0051179 localization 12.28% (7/57) 1.53 0.010198 0.037253
GO:0016301 kinase activity 12.28% (7/57) 1.5 0.011368 0.040957
GO:0006790 sulfur compound metabolic process 3.51% (2/57) 3.61 0.011755 0.041221
GO:0000124 SAGA complex 1.75% (1/57) 6.42 0.011633 0.041346
GO:0043170 macromolecule metabolic process 22.81% (13/57) 0.96 0.012866 0.044524
GO:0006807 nitrogen compound metabolic process 24.56% (14/57) 0.9 0.014218 0.048562
GO:0016746 acyltransferase activity 7.02% (4/57) 2.08 0.014793 0.049878
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (57) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms