Coexpression cluster: Cluster_27 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0022900 electron transport chain 12.22% (11/90) 6.12 0.0 0.0
GO:0019684 photosynthesis, light reaction 7.78% (7/90) 8.05 0.0 0.0
GO:0016168 chlorophyll binding 7.78% (7/90) 8.05 0.0 0.0
GO:0009767 photosynthetic electron transport chain 8.89% (8/90) 7.24 0.0 0.0
GO:0009521 photosystem 10.0% (9/90) 5.93 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 12.22% (11/90) 4.71 0.0 0.0
GO:0098796 membrane protein complex 13.33% (12/90) 4.14 0.0 0.0
GO:0015979 photosynthesis 6.67% (6/90) 5.32 0.0 0.0
GO:0016020 membrane 17.78% (16/90) 2.38 0.0 2e-06
GO:0009055 electron transfer activity 6.67% (6/90) 4.26 1e-06 2.4e-05
GO:0005575 cellular_component 27.78% (25/90) 1.46 2e-06 5.6e-05
GO:0032991 protein-containing complex 14.44% (13/90) 2.16 6e-06 0.00016
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 2.22% (2/90) 8.57 7e-06 0.000163
GO:0110165 cellular anatomical entity 22.22% (20/90) 1.56 1e-05 0.00018
GO:0050136 NADH dehydrogenase (quinone) activity 3.33% (3/90) 6.15 1e-05 0.000187
GO:0008137 NADH dehydrogenase (ubiquinone) activity 3.33% (3/90) 6.15 1e-05 0.000187
GO:0016651 oxidoreductase activity, acting on NAD(P)H 4.44% (4/90) 4.95 9e-06 0.000193
GO:0015399 primary active transmembrane transporter activity 6.67% (6/90) 3.52 1.5e-05 0.000259
GO:0016984 ribulose-bisphosphate carboxylase activity 2.22% (2/90) 7.98 2.1e-05 0.000318
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 3.33% (3/90) 5.76 2.3e-05 0.00032
GO:0003954 NADH dehydrogenase activity 3.33% (3/90) 5.76 2.3e-05 0.00032
GO:0044237 cellular metabolic process 28.89% (26/90) 1.23 2e-05 0.000323
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 3.33% (3/90) 5.69 2.6e-05 0.000339
GO:0022904 respiratory electron transport chain 3.33% (3/90) 5.69 2.6e-05 0.000339
GO:0006754 ATP biosynthetic process 3.33% (3/90) 5.57 3.4e-05 0.00041
GO:0015986 proton motive force-driven ATP synthesis 3.33% (3/90) 5.57 3.4e-05 0.00041
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 3.33% (3/90) 5.51 3.9e-05 0.000448
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.33% (3/90) 5.24 6.8e-05 0.000704
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.33% (3/90) 5.24 6.8e-05 0.000704
GO:0046034 ATP metabolic process 4.44% (4/90) 4.21 6.8e-05 0.000746
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.44% (4/90) 4.11 8.9e-05 0.00086
GO:0009144 purine nucleoside triphosphate metabolic process 4.44% (4/90) 4.11 8.9e-05 0.00086
GO:0009199 ribonucleoside triphosphate metabolic process 4.44% (4/90) 4.03 0.00011 0.000897
GO:0009142 nucleoside triphosphate biosynthetic process 3.33% (3/90) 5.02 0.000109 0.000912
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.33% (3/90) 5.02 0.000109 0.000912
GO:0022857 transmembrane transporter activity 12.22% (11/90) 1.99 9.8e-05 0.000917
GO:0008152 metabolic process 35.56% (32/90) 0.94 0.000104 0.000919
GO:0046906 tetrapyrrole binding 8.89% (8/90) 2.47 0.000101 0.000922
GO:0005215 transporter activity 12.22% (11/90) 1.96 0.000119 0.000939
GO:0009141 nucleoside triphosphate metabolic process 4.44% (4/90) 3.97 0.00013 0.001004
GO:0009523 photosystem II 3.33% (3/90) 4.9 0.00014 0.001055
GO:0022804 active transmembrane transporter activity 6.67% (6/90) 2.86 0.000188 0.001385
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.22% (2/90) 6.24 0.000305 0.002193
GO:0009150 purine ribonucleotide metabolic process 4.44% (4/90) 3.5 0.000447 0.003139
GO:0009259 ribonucleotide metabolic process 4.44% (4/90) 3.43 0.000542 0.003719
GO:0009152 purine ribonucleotide biosynthetic process 3.33% (3/90) 4.22 0.000571 0.003838
GO:0019693 ribose phosphate metabolic process 4.44% (4/90) 3.39 0.000602 0.003955
GO:0009260 ribonucleotide biosynthetic process 3.33% (3/90) 4.06 0.000785 0.004951
GO:0046390 ribose phosphate biosynthetic process 3.33% (3/90) 4.06 0.000785 0.004951
GO:0006163 purine nucleotide metabolic process 4.44% (4/90) 3.16 0.001088 0.006724
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.22% (2/90) 5.32 0.001142 0.00692
GO:0006164 purine nucleotide biosynthetic process 3.33% (3/90) 3.85 0.001213 0.007209
GO:0072521 purine-containing compound metabolic process 4.44% (4/90) 3.05 0.001427 0.00832
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 5.56% (5/90) 2.59 0.001503 0.008602
GO:0009058 biosynthetic process 12.22% (11/90) 1.52 0.001562 0.008778
GO:0015078 proton transmembrane transporter activity 3.33% (3/90) 3.66 0.001765 0.009739
GO:0009117 nucleotide metabolic process 4.44% (4/90) 2.95 0.001834 0.00977
GO:0072522 purine-containing compound biosynthetic process 3.33% (3/90) 3.64 0.001822 0.009876
GO:0006753 nucleoside phosphate metabolic process 4.44% (4/90) 2.93 0.001938 0.01015
GO:1901293 nucleoside phosphate biosynthetic process 3.33% (3/90) 3.45 0.002664 0.012474
GO:0009165 nucleotide biosynthetic process 3.33% (3/90) 3.45 0.002664 0.012474
GO:0140359 ABC-type transporter activity 3.33% (3/90) 3.44 0.002738 0.012626
GO:0009987 cellular process 32.22% (29/90) 0.73 0.002657 0.012828
GO:0050821 protein stabilization 1.11% (1/90) 8.57 0.002637 0.012934
GO:0042301 phosphate ion binding 1.11% (1/90) 8.57 0.002637 0.012934
GO:0009772 photosynthetic electron transport in photosystem II 1.11% (1/90) 8.57 0.002637 0.012934
GO:0031647 regulation of protein stability 1.11% (1/90) 8.57 0.002637 0.012934
GO:0055086 nucleobase-containing small molecule metabolic process 4.44% (4/90) 2.62 0.004206 0.019112
GO:1901137 carbohydrate derivative biosynthetic process 3.33% (3/90) 3.19 0.004468 0.020009
GO:0044271 cellular nitrogen compound biosynthetic process 7.78% (7/90) 1.77 0.004601 0.02031
GO:0042548 regulation of photosynthesis, light reaction 1.11% (1/90) 7.57 0.005267 0.021415
GO:0010109 regulation of photosynthesis 1.11% (1/90) 7.57 0.005267 0.021415
GO:0080110 sporopollenin biosynthetic process 1.11% (1/90) 7.57 0.005267 0.021415
GO:0043467 regulation of generation of precursor metabolites and energy 1.11% (1/90) 7.57 0.005267 0.021415
GO:0042549 photosystem II stabilization 1.11% (1/90) 7.57 0.005267 0.021415
GO:0019438 aromatic compound biosynthetic process 5.56% (5/90) 2.18 0.005049 0.021973
GO:1901135 carbohydrate derivative metabolic process 4.44% (4/90) 2.51 0.005529 0.022189
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 1.11% (1/90) 6.98 0.007891 0.029376
GO:0048229 gametophyte development 1.11% (1/90) 6.98 0.007891 0.029376
GO:0009555 pollen development 1.11% (1/90) 6.98 0.007891 0.029376
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity 1.11% (1/90) 6.98 0.007891 0.029376
GO:0016491 oxidoreductase activity 11.11% (10/90) 1.29 0.007772 0.0304
GO:1902600 proton transmembrane transport 2.22% (2/90) 3.92 0.007759 0.030739
GO:1901566 organonitrogen compound biosynthetic process 6.67% (6/90) 1.74 0.009348 0.034388
GO:0016831 carboxy-lyase activity 2.22% (2/90) 3.73 0.00999 0.036315
GO:0015939 pantothenate metabolic process 1.11% (1/90) 6.57 0.010507 0.036894
GO:0015940 pantothenate biosynthetic process 1.11% (1/90) 6.57 0.010507 0.036894
GO:0042626 ATPase-coupled transmembrane transporter activity 3.33% (3/90) 2.74 0.010392 0.03734
GO:0034654 nucleobase-containing compound biosynthetic process 4.44% (4/90) 2.2 0.01144 0.039718
GO:0090407 organophosphate biosynthetic process 3.33% (3/90) 2.64 0.012483 0.042857
GO:0042773 ATP synthesis coupled electron transport 1.11% (1/90) 6.24 0.013117 0.043581
GO:1901642 nucleoside transmembrane transport 1.11% (1/90) 6.24 0.013117 0.043581
GO:0015858 nucleoside transport 1.11% (1/90) 6.24 0.013117 0.043581
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (90) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms